RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	FCD_00002120	Gene ID		Accession	-
Symbol		Alias	-	Full Name	DExH-box ATP-dependent RNA helicase DExH11 isoform X1
Status	Confidence	Length	11048 bases	Strand	Plus strand
Position	3 : 13156101 - 13167148	RNA binding domain	DEAD , rRNA_proc-arch
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
FCD_00002120-RA:cds	DEAD	PF00270	7.3e-15	1
FCD_00002120-RA:cds	rRNA_proc-arch	PF13234	3.3e-38	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	FCD_00002120-RA	4610	1343aa	FCD_00002120-RA:cds

Gene Model

Click here to download FCD_00002120's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download FCD_00002120's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
FCD_00002120

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
FCD_00002120

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression