RBP Type
N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq
Ensembl ID FBgn0286051 Gene ID
38740
Accession
-
Symbol
Rexo5
Alias
CG8368;DmelCG8368;l(3)65CEa;X
Full Name
RNA exonuclease 5
Status
Confidence
Length
5056 bases
Strand
Plus strand
Position
3L : 6603684 - 6608739
RNA binding domain
RNase_T
Summary
Enables 3'-5'-exoribonuclease activity. Involved in rRNA 3'-end processing and sno(s)RNA 3'-end processing. Located in nucleolus. Orthologous to human REXO5 (RNA exonuclease 5). [provided by Alliance of Genome Resources, Apr 2022]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
FBpp0076685
RNase_T
PF00929
3.3e-10
1
FBpp0076686
RNase_T
PF00929
3.3e-10
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
-
FBtr0076976
2821
681aa
FBpp0076685
-
FBtr0076977
2505
681aa
FBpp0076686
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
FBgn0286051
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
FBgn0286051
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0000175 enables 3-5-RNA exonuclease activity 1 IDA Drosophila_melanogaster(7227) Function GO:0003676 enables nucleic acid binding 1 IEA Drosophila_melanogaster(7227) Function GO:0004527 enables exonuclease activity 2 IBA,IEA Drosophila_melanogaster(7227) Function GO:0005634 is_active_in nucleus 2 IBA,IDA Drosophila_melanogaster(7227) Component GO:0005730 located_in nucleolus 1 IDA Drosophila_melanogaster(7227) Component GO:0031125 involved_in rRNA 3-end processing 1 IMP Drosophila_melanogaster(7227) Process GO:0031126 involved_in sno(s)RNA 3-end processing 1 IMP Drosophila_melanogaster(7227) Process
Copyright © 2023, Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.