RBP Type
N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq
Ensembl ID FBgn0030468 Gene ID
32282 Accession
-
Symbol
CG1622
Alias
DmelCG1622
Full Name
NA
Status
Confidence
Length
2829 bases
Strand
Plus strand
Position
X : 13297082 - 13299910
RNA binding domain
PRP38
Summary
Predicted to be involved in mRNA splicing, via spliceosome. Part of precatalytic spliceosome. Is expressed in several structures, including anterior endoderm anlage; embryonic brain; embryonic/larval nervous system; extended germ band embryo; and germ layer. Orthologous to human PRPF38B (pre-mRNA processing factor 38B). [provided by Alliance of Genome Resources, Apr 2022]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
FBpp0073588
PRP38
PF03371 9.2e-53
1
FBpp0302613
PRP38
PF03371 1.4e-44
1
FBpp0308968
PRP38
PF03371 2.1e-31
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
-
FBtr0310465
1693
178aa
FBpp0302613
-
FBtr0339945
1987
141aa
FBpp0308968
-
FBtr0073757
1682
398aa
FBpp0073588
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
FBgn0030468 drosophila_melanogaster FBpp0087663 31.5152 16.6667 drosophila_melanogaster FBpp0073588 26.1307 13.8191
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
FBgn0030468 drosophila_melanogaster FBpp0073588 45.9799 32.1608 caenorhabditis_elegans Y108G3AL.2.2 55.9633 39.1437 FBgn0030468 drosophila_melanogaster FBpp0073588 48.995 36.1809 choloepus_hoffmanni ENSCHOP00000007932 61.9048 45.7143 FBgn0030468 drosophila_melanogaster FBpp0073588 28.8945 23.6181 choloepus_hoffmanni ENSCHOP00000006042 25.4989 20.8426 FBgn0030468 drosophila_melanogaster FBpp0073588 63.3166 46.2312 pseudonaja_textilis ENSPTXP00000006910 44.9198 32.7986 FBgn0030468 drosophila_melanogaster FBpp0073588 62.8141 46.9849 oncorhynchus_kisutch ENSOKIP00005088586 52.8541 39.5349 FBgn0030468 drosophila_melanogaster FBpp0073588 62.8141 48.7437 oncorhynchus_kisutch ENSOKIP00005059831 50.5051 39.1919 FBgn0030468 drosophila_melanogaster FBpp0073588 63.5678 48.2412 callorhinchus_milii ENSCMIP00000022121 47.4672 36.0225 FBgn0030468 drosophila_melanogaster FBpp0073588 55.0251 42.9648 astyanax_mexicanus ENSAMXP00000052001 37.1817 29.0323 FBgn0030468 drosophila_melanogaster FBpp0073588 64.8241 50.2513 sphenodon_punctatus ENSSPUP00000023119 47.2527 36.63 FBgn0030468 drosophila_melanogaster FBpp0073588 64.5729 50 poecilia_reticulata ENSPREP00000023113 55.5076 42.9806 FBgn0030468 drosophila_melanogaster FBpp0073588 16.5829 12.5628 notechis_scutatus ENSNSUP00000008456 40 30.303 FBgn0030468 drosophila_melanogaster FBpp0073588 64.5729 47.2362 latimeria_chalumnae ENSLACP00000017612 47.5926 34.8148 FBgn0030468 drosophila_melanogaster FBpp0073588 64.8241 49.2462 chrysemys_picta_bellii ENSCPBP00000041241 47.3395 35.9633 FBgn0030468 drosophila_melanogaster FBpp0073588 64.3216 49.7487 lates_calcarifer ENSLCAP00010034033 54.7009 42.3077 FBgn0030468 drosophila_melanogaster FBpp0073588 62.0603 46.9849 electrophorus_electricus ENSEEEP00000030981 49.6982 37.6258 FBgn0030468 drosophila_melanogaster FBpp0073588 35.6784 30.402 macaca_fascicularis ENSMFAP00000010385 75.1323 64.0212 FBgn0030468 drosophila_melanogaster FBpp0073588 62.3116 48.4925 oncorhynchus_mykiss ENSOMYP00000058010 48.249 37.5486 FBgn0030468 drosophila_melanogaster FBpp0073588 63.0653 46.9849 oncorhynchus_mykiss ENSOMYP00000036821 52.0747 38.7967 FBgn0030468 drosophila_melanogaster FBpp0073588 66.3317 49.4975 delphinapterus_leucas ENSDLEP00000018649 48.4404 36.1468 FBgn0030468 drosophila_melanogaster FBpp0073588 63.5678 46.9849 laticauda_laticaudata ENSLLTP00000009577 45.2594 33.4526 FBgn0030468 drosophila_melanogaster FBpp0073588 64.0704 46.9849 xenopus_tropicalis ENSXETP00000076418 50.7968 37.251 FBgn0030468 drosophila_melanogaster FBpp0073588 63.8191 49.2462 esox_lucius ENSELUP00000032488 48.1061 37.1212 FBgn0030468 drosophila_melanogaster FBpp0073588 62.5628 45.7286 gadus_morhua ENSGMOP00000012926 53.7797 39.3089 FBgn0030468 drosophila_melanogaster FBpp0073588 64.8241 50.5025 xiphophorus_maculatus ENSXMAP00000035329 55.7235 43.4125 FBgn0030468 drosophila_melanogaster FBpp0073588 65.8291 49.2462 capra_hircus ENSCHIP00000029107 48.2505 36.0958 FBgn0030468 drosophila_melanogaster FBpp0073588 60.3015 44.9749 echinops_telfairi ENSETEP00000011906 53.5714 39.9554 FBgn0030468 drosophila_melanogaster FBpp0073588 65.5779 49.4975 monodelphis_domestica ENSMODP00000002863 47.7148 36.0146 FBgn0030468 drosophila_melanogaster FBpp0073588 64.8241 50 parus_major ENSPMJP00000026405 47.2527 36.4469 FBgn0030468 drosophila_melanogaster FBpp0073588 64.8241 48.2412 sparus_aurata ENSSAUP00010040575 53.9749 40.1674 FBgn0030468 drosophila_melanogaster FBpp0073588 63.8191 48.2412 takifugu_rubripes ENSTRUP00000029701 55.0976 41.6486 FBgn0030468 drosophila_melanogaster FBpp0073588 63.8191 48.4925 anolis_carolinensis ENSACAP00000023291 38.4266 29.1982 FBgn0030468 drosophila_melanogaster FBpp0073588 28.8945 24.6231 carassius_auratus ENSCARP00000098218 72.7848 62.0253 FBgn0030468 drosophila_melanogaster FBpp0073588 61.3065 47.9899 carassius_auratus ENSCARP00000105637 51.9149 40.6383 FBgn0030468 drosophila_melanogaster FBpp0073588 61.3065 47.9899 carassius_auratus ENSCARP00000011389 51.9149 40.6383 FBgn0030468 drosophila_melanogaster FBpp0073588 65.5779 49.4975 mus_spicilegus ENSMSIP00000023544 48.244 36.414 FBgn0030468 drosophila_melanogaster FBpp0073588 64.8241 49.7487 gallus_gallus ENSGALP00010016566 46.9945 36.0656 FBgn0030468 drosophila_melanogaster FBpp0073588 66.3317 49.4975 tursiops_truncatus ENSTTRP00000006131 48.5294 36.2132 FBgn0030468 drosophila_melanogaster FBpp0073588 66.0804 48.7437 cavia_porcellus ENSCPOP00000030912 48.4346 35.7274 FBgn0030468 drosophila_melanogaster FBpp0073588 62.3116 46.7337 sus_scrofa ENSSSCP00000059309 47.1483 35.3612 FBgn0030468 drosophila_melanogaster FBpp0073588 64.8241 50 taeniopygia_guttata ENSTGUP00000004723 47.2527 36.4469 FBgn0030468 drosophila_melanogaster FBpp0073588 66.0804 49.2462 balaenoptera_musculus ENSBMSP00010009696 48.3456 36.0294 FBgn0030468 drosophila_melanogaster FBpp0073588 64.5729 49.2462 pelodiscus_sinensis ENSPSIP00000018634 47.156 35.9633 FBgn0030468 drosophila_melanogaster FBpp0073588 65.0754 48.995 ornithorhynchus_anatinus ENSOANP00000051368 45.8407 34.5133 FBgn0030468 drosophila_melanogaster FBpp0073588 62.8141 48.7437 salmo_salar ENSSSAP00000082066 49.7018 38.5686 FBgn0030468 drosophila_melanogaster FBpp0073588 62.8141 47.4874 salmo_salar ENSSSAP00000125318 51.9751 39.2931 FBgn0030468 drosophila_melanogaster FBpp0073588 64.5729 50.5025 poecilia_formosa ENSPFOP00000003951 55.5076 43.4125 FBgn0030468 drosophila_melanogaster FBpp0073588 58.2915 42.4623 tupaia_belangeri ENSTBEP00000006484 45.5796 33.2024 FBgn0030468 drosophila_melanogaster FBpp0073588 66.3317 48.995 otolemur_garnettii ENSOGAP00000017644 48.2633 35.649 FBgn0030468 drosophila_melanogaster FBpp0073588 18.3417 14.5729 heterocephalus_glaber_female ENSHGLP00000033221 53.2847 42.3358 FBgn0030468 drosophila_melanogaster FBpp0073588 65.0754 50.2513 coturnix_japonica ENSCJPP00005027176 47.1767 36.4299 FBgn0030468 drosophila_melanogaster FBpp0073588 42.9648 29.6482 ochotona_princeps ENSOPRP00000012347 31.6667 21.8519 FBgn0030468 drosophila_melanogaster FBpp0073588 66.5829 49.4975 chinchilla_lanigera ENSCLAP00000008273 48.3577 35.9489 FBgn0030468 drosophila_melanogaster FBpp0073588 62.8141 48.7437 salmo_trutta ENSSTUP00000098239 50.3018 39.0342 FBgn0030468 drosophila_melanogaster FBpp0073588 63.0653 47.4874 salmo_trutta ENSSTUP00000038714 52.8421 39.7895 FBgn0030468 drosophila_melanogaster FBpp0073588 64.5729 49.7487 aquila_chrysaetos_chrysaetos ENSACCP00020013263 46.9835 36.1974 FBgn0030468 drosophila_melanogaster FBpp0073588 52.7638 41.206 ciona_savignyi ENSCSAVP00000016029 60.1719 46.9914 FBgn0030468 drosophila_melanogaster FBpp0073588 64.8241 50 serinus_canaria ENSSCAP00000016233 47.2527 36.4469 FBgn0030468 drosophila_melanogaster FBpp0073588 63.5678 49.7487 oryzias_latipes ENSORLP00000019555 55.2402 43.2314 FBgn0030468 drosophila_melanogaster FBpp0073588 66.3317 49.4975 phocoena_sinus ENSPSNP00000012118 48.5294 36.2132 FBgn0030468 drosophila_melanogaster FBpp0073588 35.6784 29.397 seriola_dumerili ENSSDUP00000022794 77.1739 63.587 FBgn0030468 drosophila_melanogaster FBpp0073588 65.8291 49.4975 canis_lupus_familiaris ENSCAFP00845011381 42.5325 31.9805 FBgn0030468 drosophila_melanogaster FBpp0073588 63.8191 48.7437 hippocampus_comes ENSHCOP00000000290 55.7018 42.5439 FBgn0030468 drosophila_melanogaster FBpp0073588 65.8291 49.2462 bos_indicus_hybrid ENSBIXP00005007407 48.2505 36.0958 FBgn0030468 drosophila_melanogaster FBpp0073588 21.8593 16.0804 chelonoidis_abingdonii ENSCABP00000011993 46.2766 34.0426 FBgn0030468 drosophila_melanogaster FBpp0073588 66.0804 49.4975 camelus_dromedarius ENSCDRP00005004728 48.2569 36.1468 FBgn0030468 drosophila_melanogaster FBpp0073588 60.0503 45.7286 physeter_catodon ENSPCTP00005006461 49.2784 37.5258 FBgn0030468 drosophila_melanogaster FBpp0073588 66.0804 49.7487 ailuropoda_melanoleuca ENSAMEP00000004606 42.6256 32.0908 FBgn0030468 drosophila_melanogaster FBpp0073588 36.4322 29.8995 oryzias_javanicus ENSOJAP00000049891 70.3884 57.767 FBgn0030468 drosophila_melanogaster FBpp0073588 63.3166 49.2462 pygocentrus_nattereri ENSPNAP00000011801 49.7041 38.6588 FBgn0030468 drosophila_melanogaster FBpp0073588 37.6884 30.1508 cyprinodon_variegatus ENSCVAP00000004241 72.1154 57.6923 FBgn0030468 drosophila_melanogaster FBpp0073588 63.8191 48.4925 podarcis_muralis ENSPMRP00000016076 44.4834 33.8004 FBgn0030468 drosophila_melanogaster FBpp0073588 65.8291 49.2462 bos_taurus ENSBTAP00000055594 48.2505 36.0958 FBgn0030468 drosophila_melanogaster FBpp0073588 64.0704 49.2462 oreochromis_niloticus ENSONIP00000050131 55.3145 42.5163 FBgn0030468 drosophila_melanogaster FBpp0073588 66.0804 49.4975 moschus_moschiferus ENSMMSP00000004346 48.4346 36.2799 FBgn0030468 drosophila_melanogaster FBpp0073588 64.5729 48.2412 moschus_moschiferus ENSMMSP00000008138 47.7695 35.6877 FBgn0030468 drosophila_melanogaster FBpp0073588 13.0653 10.804 moschus_moschiferus ENSMMSP00000018847 55.914 46.2366 FBgn0030468 drosophila_melanogaster FBpp0073588 62.0603 45.4774 naja_naja ENSNNAP00000005330 35.9534 26.3464 FBgn0030468 drosophila_melanogaster FBpp0073588 65.8291 49.7487 rattus_norvegicus ENSRNOP00000027738 48.3395 36.5314 FBgn0030468 drosophila_melanogaster FBpp0073588 63.8191 49.7487 oryzias_melastigma ENSOMEP00000020202 55.4585 43.2314 FBgn0030468 drosophila_melanogaster FBpp0073588 64.5729 50.5025 poecilia_latipinna ENSPLAP00000015832 55.5076 43.4125 FBgn0030468 drosophila_melanogaster FBpp0073588 63.8191 47.7387 cynoglossus_semilaevis ENSCSEP00000023560 55.0976 41.2148 FBgn0030468 drosophila_melanogaster FBpp0073588 57.0352 42.2111 canis_lupus_dingo ENSCAFP00020013657 44.5972 33.0059 FBgn0030468 drosophila_melanogaster FBpp0073588 57.0352 43.9698 tetraodon_nigroviridis ENSTNIP00000018361 56.0494 43.2099 FBgn0030468 drosophila_melanogaster FBpp0073588 21.3568 18.0905 sinocyclocheilus_grahami ENSSGRP00000017391 88.5417 75 FBgn0030468 drosophila_melanogaster FBpp0073588 62.3116 47.2362 sinocyclocheilus_grahami ENSSGRP00000081505 50.6122 38.3673 FBgn0030468 drosophila_melanogaster FBpp0073588 41.4573 28.6432 sinocyclocheilus_grahami ENSSGRP00000092311 39.4737 27.2727 FBgn0030468 drosophila_melanogaster FBpp0073588 64.3216 49.7487 anabas_testudineus ENSATEP00000020781 55.1724 42.6724 FBgn0030468 drosophila_melanogaster FBpp0073588 66.3317 50 catagonus_wagneri ENSCWAP00000003596 48.3517 36.4469 FBgn0030468 drosophila_melanogaster FBpp0073588 35.6784 29.6482 sander_lucioperca ENSSLUP00000005237 75.9358 63.1016 FBgn0030468 drosophila_melanogaster FBpp0073588 63.5678 48.7437 cottoperca_gobio ENSCGOP00000022858 53.2632 40.8421 FBgn0030468 drosophila_melanogaster FBpp0073588 62.8141 48.7437 oncorhynchus_tshawytscha ENSOTSP00005033412 50.5051 39.1919 FBgn0030468 drosophila_melanogaster FBpp0073588 61.5578 45.4774 hucho_hucho ENSHHUP00000044629 52.1277 38.5106 FBgn0030468 drosophila_melanogaster FBpp0073588 63.5678 49.4975 oryzias_sinensis ENSOSIP00000001412 55.2402 43.0131 FBgn0030468 drosophila_melanogaster FBpp0073588 63.5678 47.4874 cyclopterus_lumpus ENSCLMP00005011842 52.381 39.1304 FBgn0030468 drosophila_melanogaster FBpp0073588 63.5678 49.2462 betta_splendens ENSBSLP00000037420 55.2402 42.7948 FBgn0030468 drosophila_melanogaster FBpp0073588 34.1709 28.392 amphilophus_citrinellus ENSACIP00000021200 79.0698 65.6977 FBgn0030468 drosophila_melanogaster FBpp0073588 63.5678 48.7437 scleropages_formosus ENSSFOP00015017506 46.1679 35.4015 FBgn0030468 drosophila_melanogaster FBpp0073588 62.3116 46.4824 scleropages_formosus ENSSFOP00015076000 47.5096 35.4406 FBgn0030468 drosophila_melanogaster FBpp0073588 34.1709 28.392 neolamprologus_brichardi ENSNBRP00000025145 80.4734 66.8639 FBgn0030468 drosophila_melanogaster FBpp0073588 57.5377 41.7085 vicugna_pacos ENSVPAP00000005150 42.4074 30.7407 FBgn0030468 drosophila_melanogaster FBpp0073588 63.8191 48.2412 paramormyrops_kingsleyae ENSPKIP00000019787 50.497 38.171 FBgn0030468 drosophila_melanogaster FBpp0073588 62.3116 48.7437 paramormyrops_kingsleyae ENSPKIP00000040265 45.4212 35.5311 FBgn0030468 drosophila_melanogaster FBpp0073588 63.8191 48.7437 nothobranchius_furzeri ENSNFUP00015048265 55.3377 42.2658 FBgn0030468 drosophila_melanogaster FBpp0073588 64.0704 47.4874 leptobrachium_leishanense ENSLLEP00000036330 51.4113 38.1048 FBgn0030468 drosophila_melanogaster FBpp0073588 54.2714 40.4523 ficedula_albicollis ENSFALP00000002785 41.9417 31.2621 FBgn0030468 drosophila_melanogaster FBpp0073588 35.4271 29.1457 scophthalmus_maximus ENSSMAP00000002900 76.6304 63.0435 FBgn0030468 drosophila_melanogaster FBpp0073588 62.5628 47.7387 denticeps_clupeoides ENSDCDP00000024824 51.7672 39.501 FBgn0030468 drosophila_melanogaster FBpp0073588 38.4422 28.392 notamacropus_eugenii ENSMEUP00000004437 34.1518 25.2232 FBgn0030468 drosophila_melanogaster FBpp0073588 64.5729 49.7487 strigops_habroptila ENSSHBP00005016164 46.9835 36.1974 FBgn0030468 drosophila_melanogaster FBpp0073588 64.8241 49.7487 gopherus_evgoodei ENSGEVP00005014759 47.3395 36.3303 FBgn0030468 drosophila_melanogaster FBpp0073588 28.392 23.8693 petromyzon_marinus ENSPMAP00000007872 72.4359 60.8974 FBgn0030468 drosophila_melanogaster FBpp0073588 63.5678 45.7286 erpetoichthys_calabaricus ENSECRP00000019303 48.7476 35.0674 FBgn0030468 drosophila_melanogaster FBpp0073588 65.5779 49.4975 microtus_ochrogaster ENSMOCP00000023620 48.244 36.414 FBgn0030468 drosophila_melanogaster FBpp0073588 64.0704 48.4925 myripristis_murdjan ENSMMDP00005007349 52.0408 39.3878 FBgn0030468 drosophila_melanogaster FBpp0073588 64.3216 49.4975 seriola_lalandi_dorsalis ENSSLDP00000030522 54.818 42.1842 FBgn0030468 drosophila_melanogaster FBpp0073588 65.8291 49.2462 ovis_aries_rambouillet ENSOARP00020005996 48.2505 36.0958 FBgn0030468 drosophila_melanogaster FBpp0073588 63.3166 48.7437 kryptolebias_marmoratus ENSKMAP00000007358 53.5032 41.189 FBgn0030468 drosophila_melanogaster FBpp0073588 66.0804 49.4975 cervus_hanglu_yarkandensis ENSCHYP00000028066 48.4346 36.2799 FBgn0030468 drosophila_melanogaster FBpp0073588 61.3065 47.7387 cyprinus_carpio_carpio ENSCCRP00000056619 51.5856 40.1691 FBgn0030468 drosophila_melanogaster FBpp0073588 66.0804 49.2462 monodon_monoceros ENSMMNP00015006613 48.3456 36.0294 FBgn0030468 drosophila_melanogaster FBpp0073588 64.8241 49.2462 terrapene_carolina_triunguis ENSTMTP00000023973 47.3395 35.9633 FBgn0030468 drosophila_melanogaster FBpp0073588 64.8241 49.2462 terrapene_carolina_triunguis ENSTMTP00000015706 47.3395 35.9633
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0000398 involved_in mRNA splicing, via spliceosome 1 IC Drosophila_melanogaster(7227) Process GO:0071011 part_of precatalytic spliceosome 2 HDA,IBA Drosophila_melanogaster(7227) Component
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