RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	EUTSA_v10023236mg	Gene ID		Accession	-
Symbol		Alias	-	Full Name	hypothetical protein
Status	Confidence	Length	6480 bases	Strand	Plus strand
Position	KI517881 : 5238310 - 5244789	RNA binding domain	ResIII , DEAD , rRNA_proc-arch
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ESQ29526	ResIII	PF04851	2.1e-06	1
ESQ29526	DEAD	PF00270	4.6e-20	2
ESQ29526	rRNA_proc-arch	PF13234	1.4e-68	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ESQ29526	3527	990aa	ESQ29526

Gene Model

Click here to download EUTSA_v10023236mg's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download EUTSA_v10023236mg's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
EUTSA_v10023236mg

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
EUTSA_v10023236mg

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression