RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	EUTSA_v10006811mg	Gene ID		Accession	-
Symbol		Alias	-	Full Name	hypothetical protein
Status	Confidence	Length	3384 bases	Strand	Plus strand
Position	KI517683 : 14293361 - 14296744	RNA binding domain	NOG1 , NOGCT , MMR_HSR1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ESQ36452	NOG1	PF06858	1.7e-24	1
ESQ36452	NOGCT	PF08155	1e-28	2
ESQ36452	MMR_HSR1	PF01926	1.3e-16	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ESQ36452	2852	817aa	ESQ36452

Gene Model

Click here to download EUTSA_v10006811mg's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download EUTSA_v10006811mg's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
EUTSA_v10006811mg

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
EUTSA_v10006811mg

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression