Description

Ensembl ID ENSZLMG00000012526 Gene ID Accession -
Symbol Alias - Full Name RNA polymerase I subunit A
Status Confidence Length 28539 bases Strand Minus strand
Position LAII01000054.1 : 4471508 - 4500046 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSZLMP00000019703 RNA_pol_Rpb1_4 PF05000 1.3e-24 1
ENSZLMP00000019703 RNA_pol_Rpb1_1 PF04997 2.8e-22 2
ENSZLMP00000019703 RNA_pol_Rpb1_5 PF04998 5e-102 3
ENSZLMP00000019703 RNA_pol_Rpb1_2 PF00623 6e-70 4
ENSZLMP00000019703 RNA_pol_Rpb1_3 PF04983 7.1e-38 5
ENSZLMP00000019713 RNA_pol_Rpb1_4 PF05000 1.5e-24 1
ENSZLMP00000019713 RNA_pol_Rpb1_1 PF04997 4.7e-22 2
ENSZLMP00000019713 RNA_pol_Rpb1_5 PF04998 5e-102 3
ENSZLMP00000019713 RNA_pol_Rpb1_2 PF00623 6.5e-70 4
ENSZLMP00000019713 RNA_pol_Rpb1_3 PF04983 6.8e-38 5
ENSZLMP00000019749 RNA_pol_Rpb1_4 PF05000 1.7e-24 1
ENSZLMP00000019749 RNA_pol_Rpb1_1 PF04997 2.2e-22 2
ENSZLMP00000019749 RNA_pol_Rpb1_5 PF04998 3.1e-102 3
ENSZLMP00000019749 RNA_pol_Rpb1_2 PF00623 7.7e-70 4
ENSZLMP00000019749 RNA_pol_Rpb1_3 PF04983 5.9e-38 5
ENSZLMP00000019763 RNA_pol_Rpb1_4 PF05000 1.7e-24 1
ENSZLMP00000019763 RNA_pol_Rpb1_1 PF04997 3.6e-21 2
ENSZLMP00000019763 RNA_pol_Rpb1_2 PF00623 4.9e-70 3
ENSZLMP00000019763 RNA_pol_Rpb1_3 PF04983 6.2e-38 4
ENSZLMP00000019736 RNA_pol_Rpb1_4 PF05000 1.9e-24 1
ENSZLMP00000019736 RNA_pol_Rpb1_1 PF04997 5.1e-22 2
ENSZLMP00000019736 RNA_pol_Rpb1_5 PF04998 4.5e-102 3
ENSZLMP00000019736 RNA_pol_Rpb1_2 PF00623 6.6e-70 4
ENSZLMP00000019736 RNA_pol_Rpb1_3 PF04983 6.4e-38 5
ENSZLMP00000019726 RNA_pol_Rpb1_4 PF05000 2e-24 1
ENSZLMP00000019726 RNA_pol_Rpb1_1 PF04997 1e-22 2
ENSZLMP00000019726 RNA_pol_Rpb1_5 PF04998 4.5e-102 3
ENSZLMP00000019726 RNA_pol_Rpb1_2 PF00623 6.8e-70 4
ENSZLMP00000019726 RNA_pol_Rpb1_3 PF04983 6.5e-38 5
ENSZLMP00000019747 RNA_pol_Rpb1_4 PF05000 2.2e-24 1
ENSZLMP00000019747 RNA_pol_Rpb1_1 PF04997 8.1e-23 2
ENSZLMP00000019747 RNA_pol_Rpb1_5 PF04998 4.1e-102 3
ENSZLMP00000019747 RNA_pol_Rpb1_2 PF00623 7e-70 4
ENSZLMP00000019747 RNA_pol_Rpb1_3 PF04983 7.1e-38 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSZLMT00000020238 5408 1709aa ENSZLMP00000019703
- ENSZLMT00000020248 5384 1701aa ENSZLMP00000019713
- ENSZLMT00000020261 5303 1674aa ENSZLMP00000019726
- ENSZLMT00000020271 5279 1666aa ENSZLMP00000019736
- ENSZLMT00000020285 5189 1636aa ENSZLMP00000019747
- ENSZLMT00000020287 5075 1598aa ENSZLMP00000019749
- ENSZLMT00000020301 3018 1005aa ENSZLMP00000019763

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSZLMG00000012526

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSZLMG00000012526

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression