RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSZLMG00000007360	Gene ID		Accession	-
Symbol		Alias	-	Full Name	LSM14A mRNA processing body assembly factor
Status	Confidence	Length	9584 bases	Strand	Minus strand
Position	LAII01000231.1 : 279893 - 289476	RNA binding domain	LSM14 , FDF
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSZLMP00000010548	LSM14	PF12701	3.8e-13	1
ENSZLMP00000010548	FDF	PF09532	6.3e-31	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSZLMT00000010841	1398	465aa	ENSZLMP00000010548

Gene Model

Click here to download ENSZLMG00000007360's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSZLMG00000007360's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSZLMG00000007360

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSZLMG00000007360

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression