RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSZCAG00015016602	Gene ID	113928014	Accession	-
Symbol		Alias	-	Full Name	SERPINE1 mRNA binding protein 1
Status	Confidence	Length	13401 bases	Strand	Minus strand
Position	4 : 55351947 - 55365347	RNA binding domain	HABP4_PAI-RBP1 , IHABP4_N
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSZCAP00015026318	HABP4_PAI-RBP1	PF04774	1.5e-34	1
ENSZCAP00015026318	IHABP4_N	PF16174	3.6e-45	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSZCAT00015029770	1224	407aa	ENSZCAP00015026318

Gene Model

Click here to download ENSZCAG00015016602's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSZCAG00015016602's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSZCAG00015016602

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSZCAG00015016602

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression