Description

Ensembl ID ENSZCAG00015009839 Gene ID Accession -
Symbol Alias - Full Name UPF1 RNA helicase and ATPase
Status Confidence Length 35269 bases Strand Plus strand
Position 1 : 14192965 - 14228233 RNA binding domain ResIII , UPF1_1B_dom , UPF1_Zn_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSZCAP00015016229 ResIII PF04851 3.3e-05 1
ENSZCAP00015016229 UPF1_1B_dom PF18141 5e-29 2
ENSZCAP00015016229 UPF1_Zn_bind PF09416 4.9e-32 3
ENSZCAP00015016162 ResIII PF04851 3.3e-05 1
ENSZCAP00015016162 UPF1_1B_dom PF18141 5.1e-29 2
ENSZCAP00015016162 UPF1_Zn_bind PF09416 5e-32 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSZCAT00015018359 3404 1102aa ENSZCAP00015016162
- ENSZCAT00015018439 3386 1096aa ENSZCAP00015016229

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSZCAG00015009839

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSZCAG00015009839

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression