Description

Ensembl ID ENSZCAG00015004292 Gene ID Accession -
Symbol Alias - Full Name 5'-3' exoribonuclease 1
Status Confidence Length 105675 bases Strand Minus strand
Position 1 : 97938392 - 98044066 RNA binding domain SH3_12 , XRN_N , XRN1_D1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSZCAP00015006875 SH3_12 PF18129 2.7e-19 1
ENSZCAP00015006875 XRN_N PF03159 3.4e-35 2
ENSZCAP00015006875 XRN1_D1 PF18332 1.6e-33 3
ENSZCAP00015006860 SH3_12 PF18129 2.9e-19 1
ENSZCAP00015006860 XRN_N PF03159 1.3e-93 2
ENSZCAP00015006860 XRN1_D1 PF18332 1.9e-33 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSZCAT00015007763 5518 1705aa ENSZCAP00015006860
- ENSZCAT00015007779 6162 1591aa ENSZCAP00015006875

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSZCAG00015004292

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSZCAG00015004292

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression