RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSZALG00000013154 | Gene ID |
102066741 |
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
3'-5' RNA helicase YTHDC2 |
Status |
Confidence |
Length |
28651 bases |
Strand |
Minus strand |
Position |
KB913226.1 : 839142 - 867792 |
RNA binding domain |
DEAD , R3H , HA2 , YTH , OB_NTP_bind |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSZALP00000016179 |
DEAD |
PF00270 |
1.3e-09 |
1 |
ENSZALP00000016179 |
R3H |
PF01424 |
3.7e-07 |
2 |
ENSZALP00000016179 |
HA2 |
PF04408 |
1.5e-18 |
3 |
ENSZALP00000016179 |
YTH |
PF04146 |
4.6e-41 |
4 |
ENSZALP00000016179 |
YTH |
PF04146 |
4.6e-41 |
5 |
ENSZALP00000016179 |
OB_NTP_bind |
PF07717 |
3.3e-11 |
6 |
ENSZALP00000016180 |
DEAD |
PF00270 |
1.4e-09 |
1 |
ENSZALP00000016180 |
R3H |
PF01424 |
8.9e-09 |
2 |
ENSZALP00000016180 |
HA2 |
PF04408 |
1.5e-18 |
3 |
ENSZALP00000016180 |
YTH |
PF04146 |
5.1e-41 |
4 |
ENSZALP00000016180 |
YTH |
PF04146 |
5.1e-41 |
5 |
ENSZALP00000016180 |
OB_NTP_bind |
PF07717 |
3.6e-11 |
6 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSZALT00000021672 |
4649 |
1354aa |
ENSZALP00000016179 |
- |
ENSZALT00000021673 |
4378 |
1415aa |
ENSZALP00000016180 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSZALG00000013154 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSZALG00000013154 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |