Description

Ensembl ID ENSZALG00000013154 Gene ID 102066741 Accession -
Symbol Alias - Full Name 3'-5' RNA helicase YTHDC2
Status Confidence Length 28651 bases Strand Minus strand
Position KB913226.1 : 839142 - 867792 RNA binding domain DEAD , R3H , HA2 , YTH , OB_NTP_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSZALP00000016179 DEAD PF00270 1.3e-09 1
ENSZALP00000016179 R3H PF01424 3.7e-07 2
ENSZALP00000016179 HA2 PF04408 1.5e-18 3
ENSZALP00000016179 YTH PF04146 4.6e-41 4
ENSZALP00000016179 YTH PF04146 4.6e-41 5
ENSZALP00000016179 OB_NTP_bind PF07717 3.3e-11 6
ENSZALP00000016180 DEAD PF00270 1.4e-09 1
ENSZALP00000016180 R3H PF01424 8.9e-09 2
ENSZALP00000016180 HA2 PF04408 1.5e-18 3
ENSZALP00000016180 YTH PF04146 5.1e-41 4
ENSZALP00000016180 YTH PF04146 5.1e-41 5
ENSZALP00000016180 OB_NTP_bind PF07717 3.6e-11 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSZALT00000021672 4649 1354aa ENSZALP00000016179
- ENSZALT00000021673 4378 1415aa ENSZALP00000016180

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSZALG00000013154

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSZALG00000013154

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression