RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSXMAG00000028547	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	7130 bases	Strand	Plus strand
Position	24 : 1241980 - 1249109	RNA binding domain	RnaseA
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSXMAP00000021845	RnaseA	PF00074	2.5e-11	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSXMAT00000038695	405	134aa	ENSXMAP00000021845

Gene Model

Click here to download ENSXMAG00000028547's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSXMAG00000028547's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSXMAG00000028547

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSXMAG00000028547	xiphophorus_maculatus	ENSXMAP00000021845	47.7612	37.3134	poecilia_reticulata	ENSPREP00000018493	54.7009	42.735
ENSXMAG00000028547	xiphophorus_maculatus	ENSXMAP00000021845	48.5075	36.5672	poecilia_latipinna	ENSPLAP00000001445	47.7941	36.0294

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression