RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSXMAG00000014110	Gene ID	102223343	Accession	-
Symbol	zgc	Alias	-	Full Name	tetratricopeptide repeat protein 39A-like
Status	Confidence	Length	20913 bases	Strand	Plus strand
Position	16 : 22156863 - 22177775	RNA binding domain	Iml2-TPR_39
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSXMAP00000014141	Iml2-TPR_39	PF10300	1.7e-165	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
zgc:158403-201	ENSXMAT00000014160	5802	563aa	ENSXMAP00000014141

Gene Model

Click here to download ENSXMAG00000014110's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSXMAG00000014110's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000030156	67.3633	55.7878	xiphophorus_maculatus	ENSXMAP00000014141	74.4227	61.6341
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000000581	67.931	48.9655	xiphophorus_maculatus	ENSXMAP00000014141	69.9822	50.444
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000010170	63.6833	48.1928	xiphophorus_maculatus	ENSXMAP00000014141	65.7194	49.7336
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000003747	46.5517	24.6552	xiphophorus_maculatus	ENSXMAP00000014141	47.9574	25.3996
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000033092	37.3313	20.09	xiphophorus_maculatus	ENSXMAP00000014141	44.2274	23.8011

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	95.2043	88.6323	haplochromis_burtoni	ENSHBUP00000031139	94.8673	88.3186
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	86.1456	78.1528	lates_calcarifer	ENSLCAP00010034743	82.906	75.2137
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	92.54	82.9485	oryzias_latipes	ENSORLP00000028138	92.54	82.9485
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	88.2771	82.9485	anabas_testudineus	ENSATEP00000049628	86.5854	81.3589
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	95.7371	90.7638	kryptolebias_marmoratus	ENSKMAP00000012472	95.5674	90.6028
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	83.4813	80.4618	poecilia_reticulata	ENSPREP00000019420	91.4397	88.1323
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	94.849	93.2504	poecilia_latipinna	ENSPLAP00000021511	93.1937	91.623
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	90.4085	83.8366	amphilophus_citrinellus	ENSACIP00000014877	93.9114	87.0849
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	87.5666	80.8171	oreochromis_niloticus	ENSONIP00000040640	82.03	75.7072
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	77.9751	72.8242	neolamprologus_brichardi	ENSNBRP00000016143	87.2763	81.5109
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	83.4813	75.6661	cynoglossus_semilaevis	ENSCSEP00000020002	89.8662	81.4532
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	67.4956	62.3446	fundulus_heteroclitus	ENSFHEP00000019275	78.1893	72.2222
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	88.9876	82.238	tetraodon_nigroviridis	ENSTNIP00000003541	90.5967	83.7251
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	93.0728	86.3233	larimichthys_crocea	ENSLCRP00005031233	86.0427	79.803
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	87.5666	81.1723	maylandia_zebra	ENSMZEP00005030884	85.5903	79.3403
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	87.5666	80.4618	sparus_aurata	ENSSAUP00010056039	82.1667	75.5
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	95.0266	88.4547	astatotilapia_calliptera	ENSACLP00000012695	94.6903	88.1416
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	95.5595	88.6323	seriola_dumerili	ENSSDUP00000011188	95.7295	88.79
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	94.1385	91.4742	cyprinodon_variegatus	ENSCVAP00000030470	98.6965	95.9032
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	70.1599	61.8117	oryzias_javanicus	ENSOJAP00000047981	87.9733	77.5056
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	90.2309	84.0142	acanthochromis_polyacanthus	ENSAPOP00000027463	94.4238	87.9182
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	86.3233	78.508	cottoperca_gobio	ENSCGOP00000014005	83.5052	75.945
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	94.849	88.9876	mastacembelus_armatus	ENSMAMP00000050170	94.6809	88.8298
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	95.5595	89.5204	sander_lucioperca	ENSSLUP00000012454	95.3901	89.3617
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	91.4742	84.3694	takifugu_rubripes	ENSTRUP00000035281	87.4363	80.6452
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	85.4352	78.508	pundamilia_nyererei	ENSPNYP00000019943	87.4545	80.3636
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	89.5204	84.9023	stegastes_partitus	ENSSPAP00000015062	94.382	89.5131
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	96.0924	90.5861	amphiprion_percula	ENSAPEP00000025552	95.922	90.4255
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	95.9147	90.5861	amphiprion_ocellaris	ENSAOCP00000007602	95.7447	90.4255
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	92.3623	83.1261	oryzias_melastigma	ENSOMEP00000009311	85.5263	76.9737
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	98.9343	97.8686	poecilia_formosa	ENSPFOP00000000794	98.9343	97.8686
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	82.4156	75.3108	dicentrarchus_labrax	ENSDLAP00005037718	80.9773	73.9965
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	93.0728	85.968	labrus_bergylta	ENSLBEP00000008632	93.0728	85.968
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	91.6519	82.7709	hippocampus_comes	ENSHCOP00000016091	91.4894	82.6241
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	94.1385	87.9218	nothobranchius_furzeri	ENSNFUP00015005584	94.1385	87.9218
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	88.4547	79.7513	scophthalmus_maximus	ENSSMAP00000003046	84.9829	76.6212
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	94.6714	88.0995	betta_splendens	ENSBSLP00000009419	94.3363	87.7876
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	81.1723	74.0675	cyclopterus_lumpus	ENSCLMP00005028509	78.7931	71.8966
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	95.3819	88.2771	seriola_lalandi_dorsalis	ENSSLDP00000021152	95.5516	88.4342
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	92.3623	82.9485	oryzias_sinensis	ENSOSIP00000033679	88.7372	79.6928
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	89.1652	82.238	gasterosteus_aculeatus	ENSGACP00000006671	88.225	81.3708
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	52.7531	33.5702	caenorhabditis_elegans	C32D5.6.1	51.3841	32.699
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	53.1083	35.3464	ciona_intestinalis	ENSCINP00000012827	54.6618	36.3803
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	46.714	32.5044	eptatretus_burgeri	ENSEBUP00000008806	67.2634	46.8031
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	59.1474	47.7798	latimeria_chalumnae	ENSLACP00000017344	78.169	63.1455
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	88.9876	76.5542	lepisosteus_oculatus	ENSLOCP00000009773	85.0594	73.1749
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	84.3694	75.3108	clupea_harengus	ENSCHAP00000011108	81.8966	73.1034
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	90.0533	80.4618	danio_rerio	ENSDARP00000085503	89.7345	80.177
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	89.5204	79.929	carassius_auratus	ENSCARP00000123537	75.1118	67.0641
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	88.6323	78.3304	carassius_auratus	ENSCARP00000048893	88.3186	78.0531
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	82.7709	72.1137	astyanax_mexicanus	ENSAMXP00000044967	87.4296	76.1726
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	89.3428	77.6199	ictalurus_punctatus	ENSIPUP00000009968	89.0266	77.3451
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	88.6323	76.3766	electrophorus_electricus	ENSEEEP00000038983	89.1071	76.7857
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	90.7638	79.7513	esox_lucius	ENSELUP00000055951	89.9648	79.0493
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	90.9414	81.5275	oncorhynchus_kisutch	ENSOKIP00005018074	90.1408	80.8099
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	90.9414	81.8828	oncorhynchus_kisutch	ENSOKIP00005016718	90.1408	81.162
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	90.5861	81.7052	oncorhynchus_mykiss	ENSOMYP00000060800	89.7887	80.9859
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	90.9414	81.7052	oncorhynchus_mykiss	ENSOMYP00000039720	90.1408	80.9859
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	81.7052	73.357	salmo_salar	ENSSSAP00000065947	80.7018	72.4561
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	89.698	80.4618	salmo_salar	ENSSSAP00000033580	88.5965	79.4737
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	90.7638	81.7052	salmo_trutta	ENSSTUP00000011630	87.9518	79.1738
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	90.9414	81.8828	salmo_trutta	ENSSTUP00000090300	90.1408	81.162
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	83.4813	72.8242	gadus_morhua	ENSGMOP00000061402	79.932	69.7279
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	71.9361	59.5027	notechis_scutatus	ENSNSUP00000021982	80.8383	66.8663
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	45.1155	35.3464	laticauda_laticaudata	ENSLLTP00000005573	70.9497	55.5866
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	80.1066	65.5417	pseudonaja_textilis	ENSPTXP00000027444	79.682	65.1943
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	79.2185	65.0089	anolis_carolinensis	ENSACAP00000016825	78.2456	64.2105
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	68.7389	56.1279	naja_naja	ENSNNAP00000018468	72.4719	59.176
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	72.2913	57.9041	xenopus_tropicalis	ENSXETP00000078431	68.1742	54.6064
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	56.4831	38.5435	ciona_savignyi	ENSCSAVP00000006543	56.9892	38.8889
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	85.4352	70.3375	erpetoichthys_calabaricus	ENSECRP00000025177	83.7979	68.9895
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	90.5861	81.7052	hucho_hucho	ENSHHUP00000015923	88.2353	79.5848
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	90.7638	82.0604	hucho_hucho	ENSHHUP00000066008	89.9648	81.338
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	80.8171	66.6075	leptobrachium_leishanense	ENSLLEP00000001746	71.5409	58.9623
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	69.8046	58.2593	salvator_merianae	ENSSMRP00000003359	78.4431	65.4691
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	91.6519	84.0142	myripristis_murdjan	ENSMMDP00005050850	91.9786	84.3137
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	44.0497	34.2806	chrysemys_picta_bellii	ENSCPBP00000034304	59.9034	46.6184
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	52.9307	44.9378	terrapene_carolina_triunguis	ENSTMTP00000020660	75.2525	63.8889
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	86.8561	76.7318	scleropages_formosus	ENSSFOP00015072141	86.5487	76.4602
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	73.8899	60.3908	chelonoidis_abingdonii	ENSCABP00000003981	74.6858	61.0413
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	86.5009	75.8437	paramormyrops_kingsleyae	ENSPKIP00000026245	86.0424	75.4417
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	87.0337	75.6661	denticeps_clupeoides	ENSDCDP00000015345	86.116	74.8682
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	71.5808	57.3712	gopherus_evgoodei	ENSGEVP00005027280	74.2173	59.4843
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	90.9414	81.5275	oncorhynchus_tshawytscha	ENSOTSP00005003218	77.8116	69.7568
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	86.8561	77.7975	oncorhynchus_tshawytscha	ENSOTSP00005052899	90.5556	81.1111
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	88.0995	77.7975	pygocentrus_nattereri	ENSPNAP00000001716	91.8519	81.1111
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	80.9947	66.7851	podarcis_muralis	ENSPMRP00000036779	63.0705	52.0055
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	88.4547	79.2185	cyprinus_carpio_carpio	ENSCCRP00000109781	87.522	78.3831
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	89.3428	78.6856	cyprinus_carpio_carpio	ENSCCRP00000064118	89.0266	78.4071
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	89.3428	79.0409	sinocyclocheilus_grahami	ENSSGRP00000096776	89.0266	78.7611
ENSXMAG00000014110	xiphophorus_maculatus	ENSXMAP00000014141	77.087	67.6732	sinocyclocheilus_grahami	ENSSGRP00000076732	81.7326	71.7514

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression