RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSXMAG00000000421	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	2461 bases	Strand	Minus strand
Position	24 : 929971 - 932431	RNA binding domain	RnaseA
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSXMAP00000000412	RnaseA	PF00074	1e-21	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSXMAT00000000414	411	136aa	ENSXMAP00000000412

Gene Model

Click here to download ENSXMAG00000000421's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSXMAG00000000421's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSXMAG00000000421

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSXMAG00000000421	xiphophorus_maculatus	ENSXMAP00000000412	75.7353	63.9706	poecilia_latipinna	ENSPLAP00000004911	55.9783	47.2826
ENSXMAG00000000421	xiphophorus_maculatus	ENSXMAP00000000412	52.2059	38.9706	cyprinodon_variegatus	ENSCVAP00000009020	55.4688	41.4062
ENSXMAG00000000421	xiphophorus_maculatus	ENSXMAP00000000412	82.3529	74.2647	poecilia_formosa	ENSPFOP00000020508	75.6757	68.2432
ENSXMAG00000000421	xiphophorus_maculatus	ENSXMAP00000000412	41.9118	26.4706	hucho_hucho	ENSHHUP00000048746	40.4255	25.5319

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression