| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSXETG00000001662 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
33068 bases |
Strand |
Plus strand |
| Position |
4 : 32602573 - 32635640 |
RNA binding domain |
RRM_5 , RRM_1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSXETP00000061505 |
RRM_5 |
PF13893 |
1.7e-12 |
1 |
| ENSXETP00000061505 |
RRM_5 |
PF13893 |
1.7e-12 |
2 |
| ENSXETP00000061505 |
RRM_1 |
PF00076 |
5.5e-30 |
3 |
| ENSXETP00000061505 |
RRM_1 |
PF00076 |
5.5e-30 |
4 |
| ENSXETP00000103538 |
RRM_5 |
PF13893 |
1.7e-12 |
1 |
| ENSXETP00000103538 |
RRM_5 |
PF13893 |
1.7e-12 |
2 |
| ENSXETP00000103538 |
RRM_1 |
PF00076 |
5.5e-30 |
3 |
| ENSXETP00000103538 |
RRM_1 |
PF00076 |
5.5e-30 |
4 |
| ENSXETP00000106193 |
RRM_5 |
PF13893 |
1.7e-12 |
1 |
| ENSXETP00000106193 |
RRM_5 |
PF13893 |
1.7e-12 |
2 |
| ENSXETP00000106193 |
RRM_1 |
PF00076 |
5.5e-30 |
3 |
| ENSXETP00000106193 |
RRM_1 |
PF00076 |
5.5e-30 |
4 |
| ENSXETP00000111058 |
RRM_5 |
PF13893 |
1.7e-12 |
1 |
| ENSXETP00000111058 |
RRM_5 |
PF13893 |
1.7e-12 |
2 |
| ENSXETP00000111058 |
RRM_1 |
PF00076 |
5.5e-30 |
3 |
| ENSXETP00000111058 |
RRM_1 |
PF00076 |
5.5e-30 |
4 |
| ENSXETP00000117196 |
RRM_5 |
PF13893 |
1.7e-12 |
1 |
| ENSXETP00000117196 |
RRM_5 |
PF13893 |
1.7e-12 |
2 |
| ENSXETP00000117196 |
RRM_1 |
PF00076 |
5.5e-30 |
3 |
| ENSXETP00000117196 |
RRM_1 |
PF00076 |
5.5e-30 |
4 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSXETT00000061560 |
2453 |
337aa |
ENSXETP00000061505 |
| - |
ENSXETT00000117154 |
3919 |
337aa |
ENSXETP00000117196 |
| - |
ENSXETT00000114838 |
11282 |
337aa |
ENSXETP00000103538 |
| - |
ENSXETT00000120970 |
4696 |
337aa |
ENSXETP00000106193 |
| - |
ENSXETT00000112714 |
3295 |
337aa |
ENSXETP00000111058 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSXETG00000001662 | xenopus_tropicalis | ENSXETP00000112633 | 29.9145 | 19.8718 | xenopus_tropicalis | ENSXETP00000103538 | 41.543 | 27.5964 |
| ENSXETG00000001662 | xenopus_tropicalis | ENSXETP00000102032 | 22.8311 | 14.1553 | xenopus_tropicalis | ENSXETP00000103538 | 14.8368 | 9.19881 |
| ENSXETG00000001662 | xenopus_tropicalis | ENSXETP00000032820 | 15.7895 | 6.94737 | xenopus_tropicalis | ENSXETP00000103538 | 22.2552 | 9.79228 |
| ENSXETG00000001662 | xenopus_tropicalis | ENSXETP00000067239 | 21.3953 | 10 | xenopus_tropicalis | ENSXETP00000103538 | 27.2997 | 12.7596 |
| ENSXETG00000001662 | xenopus_tropicalis | ENSXETP00000090697 | 20.8845 | 9.58231 | xenopus_tropicalis | ENSXETP00000103538 | 25.2226 | 11.5727 |
| ENSXETG00000001662 | xenopus_tropicalis | ENSXETP00000110997 | 19.6172 | 9.56938 | xenopus_tropicalis | ENSXETP00000103538 | 24.3323 | 11.8694 |
| ENSXETG00000001662 | xenopus_tropicalis | ENSXETP00000023927 | 13.0573 | 7.48408 | xenopus_tropicalis | ENSXETP00000103538 | 24.3323 | 13.9466 |
| ENSXETG00000001662 | xenopus_tropicalis | ENSXETP00000077449 | 24.734 | 11.4362 | xenopus_tropicalis | ENSXETP00000103538 | 27.5964 | 12.7596 |
| ENSXETG00000001662 | xenopus_tropicalis | ENSXETP00000015452 | 16.9708 | 9.12409 | xenopus_tropicalis | ENSXETP00000103538 | 27.5964 | 14.8368 |
| ENSXETG00000001662 | xenopus_tropicalis | ENSXETP00000087048 | 14.0823 | 7.43671 | xenopus_tropicalis | ENSXETP00000103538 | 26.4095 | 13.9466 |
| ENSXETG00000001662 | xenopus_tropicalis | ENSXETP00000049382 | 13.1783 | 6.97674 | xenopus_tropicalis | ENSXETP00000103538 | 25.2226 | 13.3531 |
| ENSXETG00000001662 | xenopus_tropicalis | ENSXETP00000053069 | 25.6637 | 17.2566 | xenopus_tropicalis | ENSXETP00000103538 | 17.2107 | 11.5727 |
| ENSXETG00000001662 | xenopus_tropicalis | ENSXETP00000072581 | 22.6891 | 10.5042 | xenopus_tropicalis | ENSXETP00000103538 | 16.0237 | 7.4184 |
| ENSXETG00000001662 | xenopus_tropicalis | ENSXETP00000014537 | 13.8801 | 8.04416 | xenopus_tropicalis | ENSXETP00000103538 | 26.1128 | 15.1335 |
| ENSXETG00000001662 | xenopus_tropicalis | ENSXETP00000059096 | 21.3235 | 12.5 | xenopus_tropicalis | ENSXETP00000103538 | 25.816 | 15.1335 |
| ENSXETG00000001662 | xenopus_tropicalis | ENSXETP00000099621 | 16.1369 | 7.57946 | xenopus_tropicalis | ENSXETP00000103538 | 19.5846 | 9.19881 |
| ENSXETG00000001662 | xenopus_tropicalis | ENSXETP00000119471 | 16.5049 | 8.73786 | xenopus_tropicalis | ENSXETP00000103538 | 20.178 | 10.6825 |
| ENSXETG00000001662 | xenopus_tropicalis | ENSXETP00000019204 | 26.4881 | 13.9881 | xenopus_tropicalis | ENSXETP00000103538 | 26.4095 | 13.9466 |
| ENSXETG00000001662 | xenopus_tropicalis | ENSXETP00000020681 | 24.1645 | 12.0823 | xenopus_tropicalis | ENSXETP00000103538 | 27.8932 | 13.9466 |
| ENSXETG00000001662 | xenopus_tropicalis | ENSXETP00000087593 | 17.5105 | 8.01688 | xenopus_tropicalis | ENSXETP00000103538 | 24.6291 | 11.276 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSXETG00000001662 | xenopus_tropicalis | ENSXETP00000103538 | 54.5994 | 43.3234 | eptatretus_burgeri | ENSEBUP00000013724 | 41.3483 | 32.809 |
| ENSXETG00000001662 | xenopus_tropicalis | ENSXETP00000103538 | 88.4273 | 80.4154 | leptobrachium_leishanense | ENSLLEP00000031193 | 87.9056 | 79.941 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
