RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSXCOG00000016313	Gene ID		Accession	-
Symbol		Alias	-	Full Name	LSM14A mRNA processing body assembly factor a
Status	Confidence	Length	8038 bases	Strand	Minus strand
Position	KQ557212.1 : 5423910 - 5431947	RNA binding domain	LSM14 , SM-ATX , FDF
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSXCOP00000021839	LSM14	PF12701	6.4e-31	1
ENSXCOP00000021839	SM-ATX	PF14438	1.5e-07	2
ENSXCOP00000021839	FDF	PF09532	4.4e-23	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSXCOT00000022103	1338	445aa	ENSXCOP00000021839

Gene Model

Click here to download ENSXCOG00000016313's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSXCOG00000016313's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSXCOG00000016313

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSXCOG00000016313

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression