RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSXCOG00000012683	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	5612 bases	Strand	Plus strand
Position	KQ557219.1 : 24958785 - 24964396	RNA binding domain	LSM14 , SM-ATX , FDF
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSXCOP00000016809	LSM14	PF12701	2.4e-32	1
ENSXCOP00000016809	SM-ATX	PF14438	3e-08	2
ENSXCOP00000016809	FDF	PF09532	5.7e-24	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSXCOT00000017026	1149	382aa	ENSXCOP00000016809

Gene Model

Click here to download ENSXCOG00000012683's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSXCOG00000012683's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSXCOG00000012683

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSXCOG00000012683

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression