RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSXCOG00000003357	Gene ID		Accession	-
Symbol		Alias	-	Full Name	regulation of nuclear pre-mRNA domain containing 1B
Status	Confidence	Length	5467 bases	Strand	Minus strand
Position	KQ557201.1 : 9129153 - 9134619	RNA binding domain	CREPT , CID
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSXCOP00000004270	CREPT	PF16566	7.7e-65	1
ENSXCOP00000004270	CID	PF04818	7e-36	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSXCOT00000004317	993	330aa	ENSXCOP00000004270

Gene Model

Click here to download ENSXCOG00000003357's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSXCOG00000003357's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSXCOG00000003357

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSXCOG00000003357

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression