RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	ENSVVUG00000004759	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	3242 bases	Strand	Minus strand
Position	NBDQ01000021.1 : 4886162 - 4889403	RNA binding domain	Ribosomal_L27
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSVVUP00000006105	Ribosomal_L27	PF01016	3.5e-15	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSVVUT00000008164	771	177aa	ENSVVUP00000006105

Gene Model

Click here to download ENSVVUG00000004759's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSVVUG00000004759's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSVVUG00000004759

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSVVUG00000004759	vulpes_vulpes	ENSVVUP00000006105	38.9831	32.7684	cercocebus_atys	ENSCATP00000019314	58.4746	49.1525
ENSVVUG00000004759	vulpes_vulpes	ENSVVUP00000006105	38.4181	32.7684	macaca_nemestrina	ENSMNEP00000004186	57.6271	49.1525
ENSVVUG00000004759	vulpes_vulpes	ENSVVUP00000006105	36.7232	32.2034	papio_anubis	ENSPANP00000044723	79.2683	69.5122
ENSVVUG00000004759	vulpes_vulpes	ENSVVUP00000006105	43.5028	38.9831	papio_anubis	ENSPANP00000058409	55.7971	50
ENSVVUG00000004759	vulpes_vulpes	ENSVVUP00000006105	39.548	33.3333	mandrillus_leucophaeus	ENSMLEP00000025885	59.322	50
ENSVVUG00000004759	vulpes_vulpes	ENSVVUP00000006105	37.8531	31.0734	mus_spicilegus	ENSMSIP00000019764	50.7576	41.6667
ENSVVUG00000004759	vulpes_vulpes	ENSVVUP00000006105	26.5537	22.5989	vicugna_pacos	ENSVPAP00000002056	56.6265	48.1928
ENSVVUG00000004759	vulpes_vulpes	ENSVVUP00000006105	38.4181	35.5932	microcebus_murinus	ENSMICP00000040549	81.9277	75.9036
ENSVVUG00000004759	vulpes_vulpes	ENSVVUP00000006105	37.8531	33.3333	cebus_imitator	ENSCCAP00000009391	76.1364	67.0455
ENSVVUG00000004759	vulpes_vulpes	ENSVVUP00000006105	32.7684	25.4237	lates_calcarifer	ENSLCAP00010053246	63.7363	49.4506
ENSVVUG00000004759	vulpes_vulpes	ENSVVUP00000006105	30.5085	23.7288	crocodylus_porosus	ENSCPRP00005003388	48.6486	37.8378
ENSVVUG00000004759	vulpes_vulpes	ENSVVUP00000006105	33.8983	27.1186	notechis_scutatus	ENSNSUP00000018168	52.6316	42.1053
ENSVVUG00000004759	vulpes_vulpes	ENSVVUP00000006105	24.8588	20.904	anas_platyrhynchos_platyrhynchos	ENSAPLP00000018681	53.012	44.5783
ENSVVUG00000004759	vulpes_vulpes	ENSVVUP00000006105	31.6384	24.8588	serinus_canaria	ENSSCAP00000000461	41.1765	32.3529
ENSVVUG00000004759	vulpes_vulpes	ENSVVUP00000006105	33.3333	27.1186	parus_major	ENSPMJP00000024942	48.3607	39.3443
ENSVVUG00000004759	vulpes_vulpes	ENSVVUP00000006105	31.0734	24.8588	sinocyclocheilus_grahami	ENSSGRP00000057380	64.7059	51.7647

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression