RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSVURG00010019926	Gene ID		Accession	-
Symbol	YARS1	Alias	-	Full Name	tyrosyl-tRNA synthetase 1
Status	Confidence	Length	19106 bases	Strand	Plus strand
Position	UNPS02014775.1 : 7490425 - 7509530	RNA binding domain	tRNA_bind , tRNA-synt_1b
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSVURP00010026000	tRNA_bind	PF01588	2.7e-33	1
ENSVURP00010026000	tRNA-synt_1b	PF00579	7.4e-77	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
YARS1-201	ENSVURT00010029607	2610	528aa	ENSVURP00010026000

Gene Model

Click here to download ENSVURG00010019926's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSVURG00010019926's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSVURG00010019926

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSVURG00010019926

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression