RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSVURG00010002326	Gene ID		Accession	-
Symbol	RARS1	Alias	-	Full Name	arginyl-tRNA synthetase 1
Status	Confidence	Length	29584 bases	Strand	Minus strand
Position	UNPS02014863.1 : 12151494 - 12181077	RNA binding domain	tRNA-synt_1d , Arg_tRNA_synt_N , DALR_1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSVURP00010002846	tRNA-synt_1d	PF00750	3.8e-159	1
ENSVURP00010002846	Arg_tRNA_synt_N	PF03485	1.1e-22	2
ENSVURP00010002846	DALR_1	PF05746	5e-33	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
RARS1-201	ENSVURT00010003222	2177	661aa	ENSVURP00010002846

Gene Model

Click here to download ENSVURG00010002326's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSVURG00010002326's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSVURG00010002326

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSVURG00010002326

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression