RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSVPAG00000006030	Gene ID	102541636	Accession	-
Symbol	RPS6	Alias	-	Full Name	ribosomal protein S6
Status	Confidence	Length	4008 bases	Strand	Minus strand
Position	GeneScaffold_2136 : 350254 - 354261	RNA binding domain	Ribosomal_S6e
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSVPAP00000005593	Ribosomal_S6e	PF01092	4.5e-59	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
RPS6-201	ENSVPAT00000006030	750	249aa	ENSVPAP00000005593

Gene Model

Click here to download ENSVPAG00000006030's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSVPAG00000006030's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSVPAG00000006030

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	98.7952	98.7952	choloepus_hoffmanni	ENSCHOP00000004087	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	callithrix_jacchus	ENSCJAP00000038310	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	cercocebus_atys	ENSCATP00000022796	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	macaca_fascicularis	ENSMFAP00000025915	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	97.992	97.5904	macaca_nemestrina	ENSMNEP00000039054	100	99.5902
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	95.1807	94.3775	gorilla_gorilla	ENSGGOP00000041090	97.5309	96.7078
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	99.1968	99.1968	pan_paniscus	ENSPPAP00000029363	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	pan_troglodytes	ENSPTRP00000060553	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	homo_sapiens	ENSP00000369757	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	99.1968	98.7952	canis_lupus_familiaris	ENSCAFP00845032118	99.1968	98.7952
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	ursus_americanus	ENSUAMP00000017030	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	ailuropoda_melanoleuca	ENSAMEP00000040457	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	felis_catus	ENSFCAP00000002340	79.0476	79.0476
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	panthera_leo	ENSPLOP00000010945	79.0476	79.0476
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	panthera_pardus	ENSPPRP00000002246	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	99.5984	99.1968	tursiops_truncatus	ENSTTRP00000001686	100	99.5968
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	99.5984	99.5984	physeter_catodon	ENSPCTP00005021230	99.5984	99.5984
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	balaenoptera_musculus	ENSBMSP00010000728	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	77.1084	67.8715	loxodonta_africana	ENSLAFP00000028147	82.4034	72.5322
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	equus_asinus	ENSEASP00005028269	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	equus_caballus	ENSECAP00000013727	99.2032	99.2032
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	sus_scrofa	ENSSSCP00000005557	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	camelus_dromedarius	ENSCDRP00005001338	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	99.5984	bos_taurus	ENSBTAP00000049139	100	99.5984
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	99.5984	capra_hircus	ENSCHIP00000006669	97.6471	97.2549
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	99.5984	ovis_aries_rambouillet	ENSOARP00020028488	100	99.5984
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	88.755	88.3534	ochotona_princeps	ENSOPRP00000000679	91.3223	90.9091
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	56.6265	56.6265	ochotona_princeps	ENSOPRP00000011207	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	oryctolagus_cuniculus	ENSOCUP00000002892	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	98.7952	98.7952	oryctolagus_cuniculus	ENSOCUP00000020279	98.7952	98.7952
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	89.1566	85.9438	cricetulus_griseus_chok1gshd	ENSCGRP00001016993	94.0678	90.678
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	84.3373	81.9277	cricetulus_griseus_chok1gshd	ENSCGRP00001027535	93.75	91.0714
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	80.7229	77.51	mesocricetus_auratus	ENSMAUP00000014559	89.7321	86.1607
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	urocitellus_parryii	ENSUPAP00010023925	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	mus_musculus	ENSMUSP00000099878	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	98.3936	98.3936	mus_spretus	MGP_SPRETEiJ_P0065358	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	34.5382	34.1365	rattus_norvegicus	ENSRNOP00000080926	93.4783	92.3913
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	22.49	20.4819	rattus_norvegicus	ENSRNOP00000065173	80	72.8571
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	35.743	33.7349	octodon_degus	ENSODEP00000000700	87.2549	82.3529
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	97.992	96.3855	cavia_porcellus	ENSCPOP00000019059	97.992	96.3855
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	heterocephalus_glaber_female	ENSHGLP00000030166	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	45.7831	44.5783	vombatus_ursinus	ENSVURP00010023428	91.2	88.8
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	90.7631	87.9518	vombatus_ursinus	ENSVURP00010019441	90.7631	87.9518
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	99.1968	98.7952	microcebus_murinus	ENSMICP00000044690	99.1968	98.7952
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	98.7952	97.992	microcebus_murinus	ENSMICP00000023543	98.7952	97.992
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	99.5984	myotis_lucifugus	ENSMLUP00000006917	100	99.5984
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	87.9518	85.9438	saimiri_boliviensis_boliviensis	ENSSBOP00000002019	96.0526	93.8596
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	catagonus_wagneri	ENSCWAP00000015627	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	56.6265	55.8233	pteropus_vampyrus	ENSPVAP00000013379	57.551	56.7347
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	99.5984	bos_mutus	ENSBMUP00000020343	100	99.5984
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	otolemur_garnettii	ENSOGAP00000014549	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	rhinolophus_ferrumequinum	ENSRFEP00010012639	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	99.5984	bos_grunniens	ENSBGRP00000003221	100	99.5984
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	65.0602	65.0602	canis_lupus_dingo	ENSCAFP00020016188	90.5028	90.5028
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	79.1165	75.502	carlito_syrichta	ENSTSYP00000016731	90.367	86.2385
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	99.1968	99.1968	phocoena_sinus	ENSPSNP00000000929	92.5094	92.5094
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	nannospalax_galili	ENSNGAP00000018868	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	96.7871	95.1807	aotus_nancymaae	ENSANAP00000000975	96.7871	95.1807
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	97.1888	96.7871	aotus_nancymaae	ENSANAP00000026225	100	99.5868
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	cebus_imitator	ENSCCAP00000026763	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	99.5984	bos_indicus_hybrid	ENSBIXP00005021735	100	99.5984
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	sciurus_vulgaris	ENSSVLP00005028434	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	98.3936	98.3936	panthera_tigris_altaica	ENSPTIP00000008583	98.3936	98.3936
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	91.9679	90.3614	ictidomys_tridecemlineatus	ENSSTOP00000028121	97.0339	95.339
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	30.1205	28.5141	moschus_moschiferus	ENSMMSP00000023084	90.3614	85.5422
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	rhinopithecus_roxellana	ENSRROP00000025541	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	90.3614	89.5582	rhinopithecus_roxellana	ENSRROP00000015237	98.2533	97.3799
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	87.9518	87.9518	rhinopithecus_roxellana	ENSRROP00000004157	98.2063	98.2063
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	95.1807	93.5743	cervus_hanglu_yarkandensis	ENSCHYP00000006407	81.7241	80.3448
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	85.9438	84.3373	bison_bison_bison	ENSBBBP00000027403	94.6903	92.9204
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	98.3936	96.7871	propithecus_coquereli	ENSPCOP00000001014	99.5935	97.9675
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	rhinopithecus_bieti	ENSRBIP00000028179	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	91.5663	90.3614	rhinopithecus_bieti	ENSRBIP00000006604	99.5633	98.2533
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	100	100	microtus_ochrogaster	ENSMOCP00000005155	100	100
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	61.4458	58.6345	chinchilla_lanigera	ENSCLAP00000015065	85.4749	81.5642
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	64.257	62.249	phascolarctos_cinereus	ENSPCIP00000011218	81.6327	79.0816
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	77.1084	61.4458	caenorhabditis_elegans	Y71A12B.1a.1	78.0488	62.1951
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	85.9438	75.1004	drosophila_melanogaster	FBpp0071087	86.2903	75.4032
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	88.3534	76.3052	ciona_intestinalis	ENSCINP00000003510	88.7097	76.6129
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	85.5422	77.9116	lepisosteus_oculatus	ENSLOCP00000013648	77.7372	70.8029
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	49.3976	47.7912	carassius_auratus	ENSCARP00000116484	93.1818	90.1515
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	20.8835	19.2771	laticauda_laticaudata	ENSLLTP00000016285	60.4651	55.814
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	37.751	35.3414	laticauda_laticaudata	ENSLLTP00000016276	92.1569	86.2745
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	62.6506	50.6024	anas_platyrhynchos_platyrhynchos	ENSAPLP00000018457	31.7073	25.6098
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	17.6707	15.6627	taeniopygia_guttata	ENSTGUP00000021366	61.9718	54.9296
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	29.7189	24.8996	podarcis_muralis	ENSPMRP00000005073	74	62
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	89.1566	75.9036	ciona_savignyi	ENSCSAVP00000012874	89.5161	76.2097
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	73.0924	59.4378	saccharomyces_cerevisiae	YPL090C	77.1186	62.7119
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	73.0924	59.4378	saccharomyces_cerevisiae	YBR181C	77.1186	62.7119
ENSVPAG00000006030	vicugna_pacos	ENSVPAP00000005593	36.1446	33.3333	sinocyclocheilus_grahami	ENSSGRP00000059789	73.7705	68.0328

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression