Description

Ensembl ID ENSVKKG00000016474 Gene ID Accession -
Symbol Alias - Full Name trinucleotide repeat containing adaptor 6B
Status Confidence Length 116613 bases Strand Plus strand
Position SJPD01000011.1 : 17732339 - 17848951 RNA binding domain TNRC6-PABC_bdg , Ago_hook
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSVKKP00000025049 TNRC6-PABC_bdg PF16608 1.4e-96 1
ENSVKKP00000025049 Ago_hook PF10427 1.4e-15 2
ENSVKKP00000025048 TNRC6-PABC_bdg PF16608 3.8e-96 1
ENSVKKP00000025047 TNRC6-PABC_bdg PF16608 4.1e-96 1
ENSVKKP00000025047 Ago_hook PF10427 5e-14 2
ENSVKKP00000025043 TNRC6-PABC_bdg PF16608 3.2e-92 1
ENSVKKP00000025043 Ago_hook PF10427 3.7e-14 2
ENSVKKP00000025035 TNRC6-PABC_bdg PF16608 3.4e-92 1
ENSVKKP00000025035 Ago_hook PF10427 5.2e-14 2
ENSVKKP00000025037 TNRC6-PABC_bdg PF16608 3.4e-92 1
ENSVKKP00000025037 Ago_hook PF10427 3.7e-14 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSVKKT00000025645 5229 1742aa ENSVKKP00000025035
- ENSVKKT00000025647 5277 1758aa ENSVKKP00000025037
- ENSVKKT00000025653 5007 1668aa ENSVKKP00000025043
- ENSVKKT00000025657 5340 1779aa ENSVKKP00000025047
- ENSVKKT00000025658 5013 1670aa ENSVKKP00000025048
- ENSVKKT00000025659 2859 952aa ENSVKKP00000025049

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSVKKG00000016474

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSVKKG00000016474

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression