Description

Ensembl ID ENSVKKG00000013091 Gene ID Accession -
Symbol Alias - Full Name cold shock domain containing E1
Status Confidence Length 34179 bases Strand Minus strand
Position SJPD01000001.1 : 137267679 - 137301857 RNA binding domain CSD , SUZ-C
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSVKKP00000019288 CSD PF00313 2.4e-85 1
ENSVKKP00000019288 CSD PF00313 2.4e-85 2
ENSVKKP00000019288 CSD PF00313 2.4e-85 3
ENSVKKP00000019288 CSD PF00313 2.4e-85 4
ENSVKKP00000019288 CSD PF00313 2.4e-85 5
ENSVKKP00000019288 SUZ-C PF12901 4.7e-15 6
ENSVKKP00000019285 CSD PF00313 3.1e-85 1
ENSVKKP00000019285 CSD PF00313 3.1e-85 2
ENSVKKP00000019285 CSD PF00313 3.1e-85 3
ENSVKKP00000019285 CSD PF00313 3.1e-85 4
ENSVKKP00000019285 CSD PF00313 3.1e-85 5
ENSVKKP00000019285 SUZ-C PF12901 4.2e-15 6
ENSVKKP00000019284 CSD PF00313 4.6e-85 1
ENSVKKP00000019284 CSD PF00313 4.6e-85 2
ENSVKKP00000019284 CSD PF00313 4.6e-85 3
ENSVKKP00000019284 CSD PF00313 4.6e-85 4
ENSVKKP00000019284 CSD PF00313 4.6e-85 5
ENSVKKP00000019284 SUZ-C PF12901 4.5e-15 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSVKKT00000019758 3387 889aa ENSVKKP00000019284
- ENSVKKT00000019759 3294 858aa ENSVKKP00000019285
- ENSVKKT00000019762 3237 839aa ENSVKKP00000019288

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSVKKG00000013091

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSVKKG00000013091

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression