RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSUTTG00000017280	Gene ID		Accession	-
Symbol		Alias	-	Full Name	CCR4-NOT transcription complex subunit 3
Status	Confidence	Length	13062 bases	Strand	Plus strand
Position	WEIE01000138.1 : 944321 - 957382	RNA binding domain	Not3 , NOT2_3_5
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSUTTP00000027059	Not3	PF04065	7.4e-95	1
ENSUTTP00000027059	NOT2_3_5	PF04153	2.7e-40	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSUTTT00000029578	2856	749aa	ENSUTTP00000027059

Gene Model

Click here to download ENSUTTG00000017280's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSUTTG00000017280's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSUTTG00000017280

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSUTTG00000017280

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression