| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSUTTG00000004040 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
poly(A)-specific ribonuclease |
| Status |
Confidence |
Length |
150944 bases |
Strand |
Minus strand |
| Position |
WEIE01000039.1 : 14022065 - 14173008 |
RNA binding domain |
RNA_bind , CAF1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSUTTP00000008758 |
RNA_bind |
PF08675 |
1.5e-33 |
1 |
| ENSUTTP00000008758 |
CAF1 |
PF04857 |
1.1e-51 |
2 |
| ENSUTTP00000008758 |
CAF1 |
PF04857 |
1.1e-51 |
3 |
| ENSUTTP00000008807 |
RNA_bind |
PF08675 |
2.1e-33 |
1 |
| ENSUTTP00000008807 |
CAF1 |
PF04857 |
1.4e-88 |
2 |
| ENSUTTP00000008728 |
RNA_bind |
PF08675 |
2.1e-33 |
1 |
| ENSUTTP00000008728 |
CAF1 |
PF04857 |
1.6e-67 |
2 |
| ENSUTTP00000008728 |
CAF1 |
PF04857 |
1.6e-67 |
3 |
| ENSUTTP00000008690 |
RNA_bind |
PF08675 |
2.2e-33 |
1 |
| ENSUTTP00000008690 |
CAF1 |
PF04857 |
1.5e-80 |
2 |
| ENSUTTP00000008690 |
CAF1 |
PF04857 |
1.5e-80 |
3 |
| ENSUTTP00000008770 |
RNA_bind |
PF08675 |
2.6e-33 |
1 |
| ENSUTTP00000008770 |
CAF1 |
PF04857 |
2.7e-44 |
2 |
| ENSUTTP00000008740 |
RNA_bind |
PF08675 |
6.3e-12 |
1 |
| ENSUTTP00000008740 |
CAF1 |
PF04857 |
2.6e-72 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSUTTT00000009635 |
1989 |
662aa |
ENSUTTP00000008690 |
| - |
ENSUTTT00000009676 |
1779 |
592aa |
ENSUTTP00000008728 |
| - |
ENSUTTT00000009690 |
1743 |
580aa |
ENSUTTP00000008740 |
| - |
ENSUTTT00000009708 |
1392 |
463aa |
ENSUTTP00000008758 |
| - |
ENSUTTT00000009720 |
1986 |
661aa |
ENSUTTP00000008770 |
| - |
ENSUTTT00000009758 |
1836 |
611aa |
ENSUTTP00000008807 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSUTTG00000004040 | | | | | | | | |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSUTTG00000004040 | | | | | | | | |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |