Description

Ensembl ID ENSUTTG00000004040 Gene ID Accession -
Symbol Alias - Full Name poly(A)-specific ribonuclease
Status Confidence Length 150944 bases Strand Minus strand
Position WEIE01000039.1 : 14022065 - 14173008 RNA binding domain RNA_bind , CAF1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSUTTP00000008758 RNA_bind PF08675 1.5e-33 1
ENSUTTP00000008758 CAF1 PF04857 1.1e-51 2
ENSUTTP00000008758 CAF1 PF04857 1.1e-51 3
ENSUTTP00000008807 RNA_bind PF08675 2.1e-33 1
ENSUTTP00000008807 CAF1 PF04857 1.4e-88 2
ENSUTTP00000008728 RNA_bind PF08675 2.1e-33 1
ENSUTTP00000008728 CAF1 PF04857 1.6e-67 2
ENSUTTP00000008728 CAF1 PF04857 1.6e-67 3
ENSUTTP00000008690 RNA_bind PF08675 2.2e-33 1
ENSUTTP00000008690 CAF1 PF04857 1.5e-80 2
ENSUTTP00000008690 CAF1 PF04857 1.5e-80 3
ENSUTTP00000008770 RNA_bind PF08675 2.6e-33 1
ENSUTTP00000008770 CAF1 PF04857 2.7e-44 2
ENSUTTP00000008740 RNA_bind PF08675 6.3e-12 1
ENSUTTP00000008740 CAF1 PF04857 2.6e-72 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSUTTT00000009635 1989 662aa ENSUTTP00000008690
- ENSUTTT00000009676 1779 592aa ENSUTTP00000008728
- ENSUTTT00000009690 1743 580aa ENSUTTP00000008740
- ENSUTTT00000009708 1392 463aa ENSUTTP00000008758
- ENSUTTT00000009720 1986 661aa ENSUTTP00000008770
- ENSUTTT00000009758 1836 611aa ENSUTTP00000008807

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSUTTG00000004040

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSUTTG00000004040

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression