RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSUTTG00000003737	Gene ID		Accession	-
Symbol		Alias	-	Full Name	U2 snRNP associated SURP domain containing
Status	Confidence	Length	50856 bases	Strand	Minus strand
Position	WEIE01000008.1 : 20222856 - 20273711	RNA binding domain	RRM_1 , Surp , cwf21 , CID
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSUTTP00000006055	RRM_1	PF00076	4e-14	1
ENSUTTP00000006055	Surp	PF01805	1.8e-18	2
ENSUTTP00000006055	cwf21	PF08312	6.6e-10	3
ENSUTTP00000006055	CID	PF04818	4.5e-08	4

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSUTTT00000006757	3090	1029aa	ENSUTTP00000006055

Gene Model

Click here to download ENSUTTG00000003737's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSUTTG00000003737's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSUTTG00000003737

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSUTTG00000003737

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression