Description

Ensembl ID ENSTTRG00000007544 Gene ID Accession -
Symbol RPUSD3 Alias - Full Name RNA pseudouridine synthase D3
Status Confidence Length 6390 bases Strand Minus strand
Position GeneScaffold_2677 : 75745 - 82134 RNA binding domain PseudoU_synth_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSTTRP00000007137 PseudoU_synth_2 PF00849 2.3e-20 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
RPUSD3-201 ENSTTRT00000007544 1059 352aa ENSTTRP00000007137

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSTTRG00000007544tursiops_truncatusENSTTRP0000001003422.099412.8913tursiops_truncatusENSTTRP0000000713734.090919.8864
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000146538.031926.0638tursiops_truncatusENSTTRP0000000713740.62527.8409
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000964128.525617.3077tursiops_truncatusENSTTRP0000000713725.284115.3409

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713760.227346.5909ornithorhynchus_anatinusENSOANP0000001913065.230850.4615
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713767.613652.2727sarcophilus_harrisiiENSSHAP0000001830368.786153.1792
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713755.965947.1591notamacropus_eugeniiENSMEUP0000001194776.653764.5914
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713744.318240.625choloepus_hoffmanniENSCHOP0000000898959.315654.3726
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713764.772755.3977erinaceus_europaeusENSEEUP0000000670564.406855.0847
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713783.238673.2955dasypus_novemcinctusENSDNOP0000003132177.513268.254
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713780.113671.875echinops_telfairiENSETEP0000000531179.886771.6714
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713773.863667.3295callithrix_jacchusENSCJAP0000008478565.326659.5477
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713742.613636.9318callithrix_jacchusENSCJAP0000008463363.291154.8523
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713786.079580.9659cercocebus_atysENSCATP0000002708686.324881.1966
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713781.818276.1364macaca_fascicularisENSMFAP000000550286459.5556
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713778.12572.4432macaca_mulattaENSMMUP0000000472277.030871.4286
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713785.795580.6818macaca_nemestrinaENSMNEP0000003421186.039980.9117
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713786.079581.25papio_anubisENSPANP0000001818886.324881.4815
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713785.511480.6818mandrillus_leucophaeusENSMLEP0000001946985.75580.9117
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713786.079579.8295gorilla_gorillaENSGGOP0000001279986.324880.057
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713785.795579.5455pan_paniscusENSPPAP0000003015786.039979.7721
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713786.363680.6818pongo_abeliiENSPPYP0000001529086.857181.1429
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713785.227378.6932homo_sapiensENSP0000037333187.463680.758
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713787.784182.3864canis_lupus_familiarisENSCAFP0084501224087.784182.3864
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713785.511479.2614pan_troglodytesENSPTRP0000007857385.75579.4872
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713786.079580.6818vulpes_vulpesENSVVUP0000003277688.081482.5581
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713788.068280.6818ailuropoda_melanoleucaENSAMEP0000001713388.068280.6818
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713780.397774.4318ursus_americanusENSUAMP0000001413288.16281.6199
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713786.931880.6818mustela_putorius_furoENSMPUP0000001702386.931880.6818
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713787.215981.5341felis_catusENSFCAP0000001317387.215981.5341
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713788.068282.1023panthera_leoENSPLOP0000000637488.068282.1023
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713787.581.25panthera_pardusENSPPRP0000000100687.581.25
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713796.306895.1705physeter_catodonENSPCTP0000501970896.581295.4416
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713767.329558.8068ochotona_princepsENSOPRP0000000213167.521458.9744
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713779.261470.7386mesocricetus_auratusENSMAUP0000001627981.104772.3837
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713777.840970.1705mus_caroliMGP_CAROLIEiJ_P007541779.651271.8023
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713755.965949.7159procavia_capensisENSPCAP0000001282268.166160.5536
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713797.159196.875delphinapterus_leucasENSDLEP0000001783697.159196.875
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713788.068283.2386bos_taurusENSBTAP0000001047890.116385.1744
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713781.534172.7273marmota_marmota_marmotaENSMMMP0000001022383.430274.4186
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713776.988669.8864mus_musculusENSMUSP0000010871578.779171.5116
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713766.761452.2727monodelphis_domesticaENSMODP0000000641762.334248.8064
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713783.806876.4205equus_asinusENSEASP0000504262479.945872.8997
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713782.954575microcebus_murinusENSMICP0000000211384.883776.7442
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713773.579566.4773rattus_norvegicusENSRNOP0000005950380.937573.125
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713777.556869.8864mus_spicilegusENSMSIP0000003196363.78557.4766
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713778.977373.2955otolemur_garnettiiENSOGAP0000001128188.53582.1656
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713754.261446.875aotus_nancymaaeENSANAP0000000086871.268761.5672
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713748.011443.75aotus_nancymaaeENSANAP0000004166781.2574.0385
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713752.840947.7273aotus_nancymaaeENSANAP0000000382474.698867.4699
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713779.545570.7386cricetulus_griseus_chok1gshdENSCGRP0000100395477.348168.7845
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713785.511478.125loxodonta_africanaENSLAFP0000001467587.579.9419
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713787.784181.5341equus_caballusENSECAP0000006542285.833379.7222
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713777.272769.8864mus_spretusMGP_SPRETEiJ_P007848479.069871.5116
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713766.193260.5114octodon_degusENSODEP0000002479382.042375
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713786.363680.3977panthera_tigris_altaicaENSPTIP0000000428888.372182.2674
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713784.37577.2727saimiri_boliviensis_boliviensisENSSBOP0000004021785.344878.1609
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713777.556869.0341jaculus_jaculusENSJJAP0000000856179.360570.6395
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713765.909161.3636dipodomys_ordiiENSDORP0000002225880.836275.2613
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713784.090975.8523neovison_visonENSNVIP0000001887259.79853.9394
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713788.920582.9545camelus_dromedariusENSCDRP0000501667785.753480
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713778.12570.7386mus_pahariMGP_PahariEiJ_P005161679.941972.3837
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713785.511481.5341capra_hircusENSCHIP0000003181090.390486.1862
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713785.511480.1136chlorocebus_sabaeusENSCSAP0000000669985.75580.3419
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713787.580.9659pteropus_vampyrusENSPVAP0000001047187.580.9659
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713785.227377.5568rhinolophus_ferrumequinumENSRFEP0001002001959.405954.0594
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713779.261471.875carlito_syrichtaENSTSYP0000003006380.172472.7011
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713769.602361.6477tupaia_belangeriENSTBEP0000000015185.069475.3472
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713789.204584.375bos_mutusENSBMUP0000001490889.458784.6154
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713785.795580.9659rhinopithecus_bietiENSRBIP0000003512686.039981.1966
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713789.204584.9432moschus_moschiferusENSMMSP0000003205489.204584.9432
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713779.261470.7386nannospalax_galiliENSNGAP0000002590483.283674.3284
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713757.954548.8636oryctolagus_cuniculusENSOCUP0000002181847.004639.6313
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713797.443297.1591monodon_monocerosENSMMNP0001501448297.443297.1591
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713789.204584.375bison_bison_bisonENSBBBP0000001089489.458784.6154
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713775.852367.6136heterocephalus_glaber_femaleENSHGLP0000001635768.637561.1825
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713786.647779.8295myotis_lucifugusENSMLUP0000000560287.643780.7471
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713789.488684.6591cervus_hanglu_yarkandensisENSCHYP0000002731489.488684.6591
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713768.181855.6818vombatus_ursinusENSVURP0001001435370.588257.6471
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713755.397746.3068chinchilla_lanigeraENSCLAP0000000455662.101951.9108
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713773.011467.6136nomascus_leucogenysENSNLEP0000000509985.382179.0698
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713783.806875.5682sciurus_vulgarisENSSVLP0000503148484.045675.7835
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713782.386473.8636urocitellus_parryiiENSUPAP0001002908484.302375.5814
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713788.920584.6591ovis_aries_rambouilletENSOARP0002003263889.173884.9003
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713786.363680.3977catagonus_wagneriENSCWAP0000002891686.363680.3977
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713779.261469.8864microtus_ochrogasterENSMOCP0000002697081.104771.5116
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713787.784181.8182sus_scrofaENSSSCP0000001231387.784181.8182
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713785.795579.2614prolemur_simusENSPSMP0000001333486.039979.4872
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713789.204584.375bos_grunniensENSBGRP0000001705789.458784.6154
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713796.022795.1705balaenoptera_musculusENSBMSP0001001075896.022795.1705
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713785.511480.6818rhinopithecus_roxellanaENSRROP0000004007777.377973.0077
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713786.079580.1136propithecus_coquereliENSPCOP0000001340986.079580.1136
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713780.397772.7273peromyscus_maniculatus_bairdiiENSPEMP0000001875282.267474.4186
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713784.090975.2841ictidomys_tridecemlineatusENSSTOP0000000188884.090975.2841
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713797.727397.4432phocoena_sinusENSPSNP0000002447997.727397.4432
ENSTTRG00000007544tursiops_truncatusENSTTRP000000071377564.7727cavia_porcellusENSCPOP0000002419974.366264.2253
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713784.659177.8409cebus_imitatorENSCCAP0000002349985.632278.7356
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713763.636452.5568phascolarctos_cinereusENSPCIP0000002943473.202660.4575
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713787.784180.9659ursus_maritimusENSUMAP0000002584187.784180.9659
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713787.784182.3864canis_lupus_dingoENSCAFP0002001058187.784182.3864
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713789.204584.375bos_indicus_hybridENSBIXP0000502534989.458784.6154
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713727.272715.3409caenorhabditis_elegansZK287.7.124.806213.9535
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713735.795523.2955ciona_intestinalisENSCINP0000000776037.168124.1888
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713738.636424.7159eptatretus_burgeriENSEBUP0000002529844.444428.4314
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713739.772727.5568callorhinchus_miliiENSCMIP0000002857761.67442.7313
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713716.761412.7841latimeria_chalumnaeENSLACP0000000713958.415844.5545
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713758.522740.3409xenopus_tropicalisENSXETP0000005080649.878934.3826
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713749.431840.3409chrysemys_picta_belliiENSCPBP0000001159366.666754.4061
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713749.147740.3409crocodylus_porosusENSCPRP0000502437143.142135.4115
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713724.715920.1705sphenodon_punctatusENSSPUP0000002109262.142950.7143
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713759.090940.9091laticauda_laticaudataENSLLTP0000002346851.231535.468
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713756.2539.7727pseudonaja_textilisENSPTXP0000001864565.346546.2046
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713751.136437.5notechis_scutatusENSNSUP0000000558167.924549.8113
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713753.409139.7727gallus_gallusENSGALP0001003150760.450245.0161
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713739.772730.3977parus_majorENSPMJP0000000558458.823544.958
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713736.363626.1364naja_najaENSNNAP0000000184670.329750.5494
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713752.272739.2045taeniopygia_guttataENSTGUP0000000900663.230247.4227
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713746.590934.6591geospiza_fortisENSGFOP0000000993462.121246.2121
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713746.87528.9773erpetoichthys_calabaricusENSECRP0000003345153.571433.1169
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713752.556839.2045aquila_chrysaetos_chrysaetosENSACCP0002001501960.855345.3947
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713758.806846.0227anolis_carolinensisENSACAP0000000963658.974446.1538
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713751.704539.4886strigops_habroptilaENSSHBP0000501203560.869646.4883
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713757.670539.2045leptobrachium_leishanenseENSLLEP0000004455656.232738.2271
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713719.034110.7955hucho_huchoENSHHUP0000002184621.069211.9497
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713758.806845.4545podarcis_muralisENSPMRP0000003055861.061947.1976
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713758.238646.875gopherus_evgoodeiENSGEVP0000501483963.862951.4019
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713749.147736.9318ficedula_albicollisENSFALP0000002030059.655244.8276
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713736.363626.9886chelonoidis_abingdoniiENSCABP0000000770358.715643.578
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713756.534145.4545terrapene_carolina_triunguisENSTMTP0000002578162.382450.1567
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713724.715919.6023terrapene_carolina_triunguisENSTMTP0000002558758.389346.3087
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713719.034111.0795oncorhynchus_tshawytschaENSOTSP0000503881019.420311.3043
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713731.534117.3295oncorhynchus_tshawytschaENSOTSP0000503872234.259318.8272
ENSTTRG00000007544tursiops_truncatusENSTTRP0000000713760.511445.4545salvator_merianaeENSSMRP0000002120662.280746.7836

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression