RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSTTRG00000001950	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	374 bases	Strand	Minus strand
Position	scaffold_85554 : 5781 - 6154	RNA binding domain	Ribosomal_S26e
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSTTRP00000001831	Ribosomal_S26e	PF01283	5.2e-47	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSTTRT00000001950	348	116aa	ENSTTRP00000001831

Gene Model

Click here to download ENSTTRG00000001950's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSTTRG00000001950's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000014228	92.1739	86.087	tursiops_truncatus	ENSTTRP00000001831	91.3793	85.3448
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001659	87.8261	80	tursiops_truncatus	ENSTTRP00000001831	87.069	79.3103

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	82.7586	75.8621	erinaceus_europaeus	ENSEEUP00000009888	92.3077	84.6154
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	79.3103	70.6897	dasypus_novemcinctus	ENSDNOP00000020450	80	71.3043
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	63.7931	53.4483	echinops_telfairi	ENSETEP00000008924	78.7234	65.9574
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	82.7586	75	callithrix_jacchus	ENSCJAP00000063194	82.0513	74.359
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	84.4828	79.3103	cercocebus_atys	ENSCATP00000020782	83.7607	78.6325
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	87.069	80.1724	macaca_fascicularis	ENSMFAP00000013190	87.8261	80.8696
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	81.0345	macaca_nemestrina	ENSMNEP00000005022	89.5652	81.7391
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	84.4828	76.7241	macaca_nemestrina	ENSMNEP00000041544	83.7607	76.0684
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	87.931	81.0345	papio_anubis	ENSPANP00000024159	88.6957	81.7391
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	77.5862	70.6897	mandrillus_leucophaeus	ENSMLEP00000028752	80.3571	73.2143
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	70.6897	64.6552	gorilla_gorilla	ENSGGOP00000040988	89.1304	81.5217
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	89.6552	83.6207	pongo_abelii	ENSPPYP00000042156	90.4348	84.3478
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	81.8966	73.2759	canis_lupus_familiaris	ENSCAFP00845024266	82.6087	73.913
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	69.8276	62.931	pan_troglodytes	ENSPTRP00000087168	88.0435	79.3478
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	75.8621	65.5172	vulpes_vulpes	ENSVVUP00000001475	78.5714	67.8571
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	74.1379	65.5172	felis_catus	ENSFCAP00000033967	74.1379	65.5172
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	62.931	51.7241	panthera_pardus	ENSPPRP00000018353	62.3932	51.2821
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	82.7586	73.2759	physeter_catodon	ENSPCTP00005004745	68.5714	60.7143
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	89.6552	82.7586	mesocricetus_auratus	ENSMAUP00000017463	90.4348	83.4783
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	89.6552	82.7586	otolemur_garnettii	ENSOGAP00000018041	90.4348	83.4783
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	82.7586	aotus_nancymaae	ENSANAP00000000456	89.5652	83.4783
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	91.3793	82.7586	aotus_nancymaae	ENSANAP00000000335	57.6087	52.1739
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	84.4828	78.4483	equus_caballus	ENSECAP00000021737	66.6667	61.9048
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	85.3448	79.3103	jaculus_jaculus	ENSJJAP00000001266	86.087	80
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	78.4483	64.6552	jaculus_jaculus	ENSJJAP00000001569	72.8	60
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	91.3793	83.6207	camelus_dromedarius	ENSCDRP00005026640	92.1739	84.3478
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	86.2069	81.0345	rhinolophus_ferrumequinum	ENSRFEP00010010832	86.9565	81.7391
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	87.069	79.3103	rhinolophus_ferrumequinum	ENSRFEP00010028287	87.8261	80
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	90.5172	84.4828	carlito_syrichta	ENSTSYP00000034001	91.3043	85.2174
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	43.9655	38.7931	tupaia_belangeri	ENSTBEP00000008898	76.1194	67.1642
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	81.0345	70.6897	heterocephalus_glaber_female	ENSHGLP00000028295	82.4561	71.9298
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	80.1724	71.5517	vombatus_ursinus	ENSVURP00010002949	80.8696	72.1739
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	80.1724	71.5517	vombatus_ursinus	ENSVURP00010005281	80.8696	72.1739
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	82.7586	75	chinchilla_lanigera	ENSCLAP00000006110	83.4783	75.6522
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	87.931	81.0345	sciurus_vulgaris	ENSSVLP00005002700	88.6957	81.7391
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	84.4828	77.5862	urocitellus_parryii	ENSUPAP00010019252	82.3529	75.6302
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	73.2759	60.3448	catagonus_wagneri	ENSCWAP00000010770	46.7033	38.4615
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	68.1034	57.7586	sus_scrofa	ENSSSCP00000075236	80.6122	68.3673
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	78.4483	68.1034	prolemur_simus	ENSPSMP00000032395	77.7778	67.5214
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	84.4828	74.1379	cavia_porcellus	ENSCPOP00000012518	85.2174	74.7826
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	84.4828	75.8621	phascolarctos_cinereus	ENSPCIP00000050528	74.2424	66.6667
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	81.8966	73.2759	canis_lupus_dingo	ENSCAFP00020008292	82.6087	73.913
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	75	62.931	caenorhabditis_elegans	F39B2.6.1	74.359	62.3932
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	76.7241	64.6552	drosophila_melanogaster	FBpp0312181	78.0702	65.7895
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	73.2759	51.7241	ciona_intestinalis	ENSCINP00000022141	71.4286	50.4202
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	82.7586	75	eptatretus_burgeri	ENSEBUP00000027399	51.3369	46.5241
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	81.0345	callorhinchus_milii	ENSCMIP00000003330	88.7931	81.0345
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	85.3448	75.8621	clupea_harengus	ENSCHAP00000000935	59.6386	53.012
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	90.5172	81.8966	esox_lucius	ENSELUP00000007710	90.5172	81.8966
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	80.1724	gadus_morhua	ENSGMOP00000005042	89.5652	80.8696
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	81.0345	fundulus_heteroclitus	ENSFHEP00000007065	85.8333	78.3333
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	87.069	80.1724	poecilia_reticulata	ENSPREP00000018865	88.5965	81.5789
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	84.4828	75.8621	xiphophorus_maculatus	ENSXMAP00000020589	77.7778	69.8413
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	81.8966	cyclopterus_lumpus	ENSCLMP00005022106	89.5652	82.6087
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	87.931	81.8966	oryzias_latipes	ENSORLP00000001910	89.4737	83.3333
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	81.0345	oreochromis_niloticus	ENSONIP00000024003	69.1275	63.0872
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	81.0345	haplochromis_burtoni	ENSHBUP00000026012	69.1275	63.0872
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	81.0345	astatotilapia_calliptera	ENSACLP00000036906	69.1275	63.0872
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	80.1724	sparus_aurata	ENSSAUP00010046153	89.5652	80.8696
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	86.2069	79.3103	lates_calcarifer	ENSLCAP00010038689	86.9565	80
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	87.069	80.1724	xenopus_tropicalis	ENSXETP00000084273	84.8739	78.1513
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	70.6897	53.4483	saccharomyces_cerevisiae	YER131W	68.9076	52.1008
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	70.6897	53.4483	saccharomyces_cerevisiae	YGL189C	68.9076	52.1008
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	81.8966	oryzias_sinensis	ENSOSIP00000019396	62.0482	57.2289
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	86.2069	77.5862	stegastes_partitus	ENSSPAP00000016519	73.5294	66.1765
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	87.931	81.0345	kryptolebias_marmoratus	ENSKMAP00000026273	73.913	68.1159
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	81.0345	neolamprologus_brichardi	ENSNBRP00000022266	50.2439	45.8537
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	81.8966	amphiprion_ocellaris	ENSAOCP00000004163	89.5652	82.6087
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	81.8966	anabas_testudineus	ENSATEP00000066817	89.5652	82.6087
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	87.069	80.1724	seriola_dumerili	ENSSDUP00000010222	87.8261	80.8696
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	85.3448	79.3103	takifugu_rubripes	ENSTRUP00000030482	89.1892	82.8829
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	87.069	80.1724	taeniopygia_guttata	ENSTGUP00000031990	46.1187	42.4658
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	87.069	79.3103	taeniopygia_guttata	ENSTGUP00000021255	72.6619	66.187
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	63.7931	58.6207	geospiza_fortis	ENSGFOP00000006655	81.3187	74.7253
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	87.069	80.1724	cynoglossus_semilaevis	ENSCSEP00000005492	87.8261	80.8696
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	81.8966	gasterosteus_aculeatus	ENSGACP00000000955	89.5652	82.6087
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	87.069	80.1724	seriola_lalandi_dorsalis	ENSSLDP00000032818	86.3248	79.4872
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	73.2759	51.7241	ciona_savignyi	ENSCSAVP00000006313	71.4286	50.4202
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	87.069	78.4483	anolis_carolinensis	ENSACAP00000005170	60.119	54.1667
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	81.8966	larimichthys_crocea	ENSLCRP00005009509	89.5652	82.6087
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	85.3448	79.3103	dicentrarchus_labrax	ENSDLAP00005011862	89.1892	82.8829
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	81.8966	oryzias_melastigma	ENSOMEP00000008366	75.7353	69.8529
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	87.931	81.0345	tetraodon_nigroviridis	ENSTNIP00000017621	88.6957	81.7391
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	87.069	80.1724	amphilophus_citrinellus	ENSACIP00000029656	88.5965	81.5789
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	85.3448	75.8621	cottoperca_gobio	ENSCGOP00000005490	78.5714	69.8413
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	81.8966	mastacembelus_armatus	ENSMAMP00000060143	89.5652	82.6087
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	81.8966	sander_lucioperca	ENSSLUP00000040919	89.5652	82.6087
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	81.8966	amphiprion_percula	ENSAPEP00000022814	89.5652	82.6087
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	87.931	81.0345	nothobranchius_furzeri	ENSNFUP00015021407	88.6957	81.7391
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	87.931	81.0345	betta_splendens	ENSBSLP00000039733	85.7143	78.9916
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	81.0345	poecilia_latipinna	ENSPLAP00000027184	89.5652	81.7391
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	87.069	80.1724	labrus_bergylta	ENSLBEP00000024990	87.8261	80.8696
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	89.6552	81.0345	myripristis_murdjan	ENSMMDP00005046784	90.4348	81.7391
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	84.4828	76.7241	myripristis_murdjan	ENSMMDP00005000662	73.6842	66.9173
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	87.069	79.3103	strigops_habroptila	ENSSHBP00005017009	55.4945	50.5494
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	81.0345	pundamilia_nyererei	ENSPNYP00000002279	76.2963	69.6296
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	48.2759	44.8276	ficedula_albicollis	ENSFALP00000020802	40.5797	37.6812
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	86.2069	80.1724	hippocampus_comes	ENSHCOP00000018716	87.7193	81.5789
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	81.8966	scophthalmus_maximus	ENSSMAP00000070672	89.5652	82.6087
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	87.931	80.1724	poecilia_formosa	ENSPFOP00000001551	88.6957	80.8696
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	47.4138	43.9655	struthio_camelus_australis	ENSSCUP00000025118	48.2456	44.7368
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	87.931	81.0345	oryzias_javanicus	ENSOJAP00000004472	88.6957	81.7391
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	62.069	55.1724	salvator_merianae	ENSSMRP00000020013	71.2871	63.3663
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	88.7931	81.0345	cyprinodon_variegatus	ENSCVAP00000000376	79.845	72.8682
ENSTTRG00000001950	tursiops_truncatus	ENSTTRP00000001831	86.2069	77.5862	acanthochromis_polyacanthus	ENSAPOP00000012661	72.4638	65.2174

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression