RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSTRUG00000031737	Gene ID	101065275	Accession	-
Symbol		Alias	-	Full Name	eukaryotic translation initiation factor 5A-1-like
Status	Confidence	Length	2605 bases	Strand	Minus strand
Position	2 : 4886387 - 4888991	RNA binding domain	eIF-5a
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSTRUP00000088024	eIF-5a	PF01287	6e-22	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSTRUT00000078667	654	155aa	ENSTRUP00000088024

Gene Model

Click here to download ENSTRUG00000031737's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSTRUG00000031737's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000081023	71.4286	53.4161	takifugu_rubripes	ENSTRUP00000088024	74.1936	55.4839
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000029644	80	65.8064	takifugu_rubripes	ENSTRUP00000088024	80	65.8064

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	77.4194	60.6452	fundulus_heteroclitus	ENSFHEP00000032194	74.0741	58.0247
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	59.3548	52.2581	poecilia_reticulata	ENSPREP00000018893	83.6364	73.6364
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	59.3548	52.2581	poecilia_reticulata	ENSPREP00000018870	83.6364	73.6364
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	79.3548	67.7419	oryzias_latipes	ENSORLP00000042733	62.4365	53.2995
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	80.6452	65.8064	xiphophorus_maculatus	ENSXMAP00000009055	59.5238	48.5714
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	74.1936	63.2258	cyclopterus_lumpus	ENSCLMP00005019883	75.6579	64.4737
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	80	65.8064	oreochromis_niloticus	ENSONIP00000062490	81.0458	66.6667
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	80	66.4516	astatotilapia_calliptera	ENSACLP00000010295	81.0458	67.3203
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	80	66.4516	haplochromis_burtoni	ENSHBUP00000030333	81.0458	67.3203
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	80.6452	63.871	lates_calcarifer	ENSLCAP00010015866	82.2368	65.1316
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	76.129	63.871	sparus_aurata	ENSSAUP00010066780	72.3926	60.7362
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	47.0968	38.0645	cyprinodon_variegatus	ENSCVAP00000031913	72.2772	58.4158
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	47.0968	38.0645	cyprinodon_variegatus	ENSCVAP00000018220	72.2772	58.4158
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	79.3548	67.7419	oryzias_melastigma	ENSOMEP00000015292	79.3548	67.7419
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	74.8387	61.9355	poecilia_latipinna	ENSPLAP00000006107	77.8523	64.4295
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	76.7742	59.3548	scophthalmus_maximus	ENSSMAP00000026689	77.2727	59.7403
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	80	66.4516	neolamprologus_brichardi	ENSNBRP00000012684	81.0458	67.3203
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	58.7097	50.3226	amphilophus_citrinellus	ENSACIP00000007734	83.4862	71.5596
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	78.0645	65.8064	oryzias_javanicus	ENSOJAP00000029580	69.5402	58.6207
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	80	66.4516	maylandia_zebra	ENSMZEP00005018749	81.0458	67.3203
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	79.3548	65.8064	dicentrarchus_labrax	ENSDLAP00005066449	80.9211	67.1053
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	80	66.4516	stegastes_partitus	ENSSPAP00000002384	81.0458	67.3203
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	78.7097	65.1613	gasterosteus_aculeatus	ENSGACP00000014561	80.2632	66.4474
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	80	66.4516	pundamilia_nyererei	ENSPNYP00000007810	81.0458	67.3203
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	77.4194	64.5161	sander_lucioperca	ENSSLUP00000042737	78.9474	65.7895
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	79.3548	67.7419	oryzias_sinensis	ENSOSIP00000018603	80.3922	68.6274
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	74.8387	60.6452	labrus_bergylta	ENSLBEP00000027664	75.3247	61.039
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	80	66.4516	kryptolebias_marmoratus	ENSKMAP00000008059	81.0458	67.3203
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	80.6452	65.8064	acanthochromis_polyacanthus	ENSAPOP00000007646	81.6993	66.6667
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	80.6452	65.8064	poecilia_formosa	ENSPFOP00000011141	80.1282	65.3846
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	80	65.8064	betta_splendens	ENSBSLP00000048314	81.0458	66.6667
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	80	67.0968	amphiprion_percula	ENSAPEP00000016170	66.3102	55.615
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	80	65.1613	mastacembelus_armatus	ENSMAMP00000036607	81.0458	66.0131
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	78.7097	65.1613	anabas_testudineus	ENSATEP00000054103	79.7386	66.0131
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	78.0645	63.871	cottoperca_gobio	ENSCGOP00000029100	60.199	49.2537
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	38.7097	32.9032	cottoperca_gobio	ENSCGOP00000055232	70.5882	60
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	54.1936	41.2903	cynoglossus_semilaevis	ENSCSEP00000005061	75	57.1429
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	80	65.1613	hippocampus_comes	ENSHCOP00000011238	81.0458	66.0131
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	78.7097	62.5806	tetraodon_nigroviridis	ENSTNIP00000009440	80.7947	64.2384
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	80	67.0968	amphiprion_ocellaris	ENSAOCP00000015267	81.0458	67.9739
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	80.6452	66.4516	nothobranchius_furzeri	ENSNFUP00015053852	81.6993	67.3203
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	74.8387	54.1936	caenorhabditis_elegans	F54C9.1.2	72.0497	52.1739
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	74.1936	54.1936	caenorhabditis_elegans	T05G5.10a.1	58.9744	43.0769
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	78.7097	58.0645	drosophila_melanogaster	FBpp0072082	76.7296	56.6038
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	80.6452	65.1613	myripristis_murdjan	ENSMMDP00005008481	79.1139	63.924
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	74.1936	51.6129	saccharomyces_cerevisiae	YEL034W	73.2484	50.9554
ENSTRUG00000031737	takifugu_rubripes	ENSTRUP00000088024	74.1936	52.9032	saccharomyces_cerevisiae	YJR047C	73.2484	52.2293

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression