RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSTRUG00000013414	Gene ID	105417136	Accession	-
Symbol		Alias	-	Full Name	cAMP-regulated phosphoprotein 21-like
Status	Confidence	Length	4721 bases	Strand	Minus strand
Position	12 : 1848894 - 1853614	RNA binding domain	R3H , SUZ
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSTRUP00000048004	R3H	PF01424	4e-11	1
ENSTRUP00000048004	SUZ	PF12752	2.3e-10	2
ENSTRUP00000034208	R3H	PF01424	4.2e-11	1
ENSTRUP00000034208	SUZ	PF12752	2.4e-10	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSTRUT00000034334	2229	657aa	ENSTRUP00000034208
-	ENSTRUT00000054557	2157	633aa	ENSTRUP00000048004

Gene Model

Click here to download ENSTRUG00000013414's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSTRUG00000013414's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000060873	27.6557	19.1392	takifugu_rubripes	ENSTRUP00000034208	45.9665	31.8113
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000029450	47.3404	34.3085	takifugu_rubripes	ENSTRUP00000034208	27.0928	19.6347

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	39.726	33.6377	fundulus_heteroclitus	ENSFHEP00000006864	40.4651	34.2636
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	41.2481	33.9422	oryzias_latipes	ENSORLP00000014545	42.41	34.8983
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	40.0304	34.551	xiphophorus_maculatus	ENSXMAP00000003002	41.0938	35.4688
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	40.3349	35.9209	cyclopterus_lumpus	ENSCLMP00005041131	41.4062	36.875
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	28.3105	25.2664	oreochromis_niloticus	ENSONIP00000002892	51.3812	45.8564
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	42.618	36.3775	haplochromis_burtoni	ENSHBUP00000016560	42.2961	36.1027
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	31.8113	29.0715	lates_calcarifer	ENSLCAP00010017512	51.2255	46.8137
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	44.4444	38.5084	sparus_aurata	ENSSAUP00010008566	43.6472	37.8176
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	40.1826	33.79	cyprinodon_variegatus	ENSCVAP00000005775	41.1215	34.5794
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	39.8782	33.4855	oryzias_melastigma	ENSOMEP00000008469	40.3698	33.8983
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	40.0304	33.6377	oryzias_melastigma	ENSOMEP00000014703	40.5864	34.1049
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	40.4871	34.7032	poecilia_latipinna	ENSPLAP00000022434	41.5625	35.625
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	32.5723	29.6804	scophthalmus_maximus	ENSSMAP00000017501	42.126	38.3858
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	40.1826	32.8767	oryzias_javanicus	ENSOJAP00000033981	40.8669	33.4365
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	45.0533	39.4216	dicentrarchus_labrax	ENSDLAP00005017342	44.6455	39.0649
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	45.0533	38.3562	stegastes_partitus	ENSSPAP00000022297	44.2451	37.6682
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	36.9863	32.8767	gasterosteus_aculeatus	ENSGACP00000007376	46.374	41.2214
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	43.6834	38.965	sander_lucioperca	ENSSLUP00000057187	43.4848	38.7879
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	42.0091	34.2466	oryzias_sinensis	ENSOSIP00000021308	37.8601	30.8642
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	42.4658	36.6819	labrus_bergylta	ENSLBEP00000003584	46.6555	40.301
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	42.0091	35.312	kryptolebias_marmoratus	ENSKMAP00000005343	42.3963	35.6375
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	44.4444	38.3562	acanthochromis_polyacanthus	ENSAPOP00000018524	43.9098	37.8947
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	44.9011	39.2694	larimichthys_crocea	ENSLCRP00005025131	44.4947	38.914
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	39.8782	34.2466	poecilia_formosa	ENSPFOP00000008055	40.9375	35.1562
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	43.6834	37.7473	betta_splendens	ENSBSLP00000042177	43.4848	37.5758
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	44.7489	38.965	amphiprion_percula	ENSAPEP00000020041	44.012	38.3234
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	45.0533	39.5738	mastacembelus_armatus	ENSMAMP00000017364	44.8485	39.3939
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	35.4642	30.7458	anabas_testudineus	ENSATEP00000022352	49.8929	43.2548
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	43.8356	38.6606	cottoperca_gobio	ENSCGOP00000038856	46.6019	41.1003
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	44.7489	38.965	seriola_dumerili	ENSSDUP00000012618	44.078	38.3808
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	39.2694	35.6164	tetraodon_nigroviridis	ENSTNIP00000020099	55.3648	50.2146
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	44.5967	38.8128	amphiprion_ocellaris	ENSAOCP00000000931	43.8623	38.1737
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	37.1385	33.0289	seriola_lalandi_dorsalis	ENSSLDP00000012624	53.2751	47.3799
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	38.5084	30.5936	nothobranchius_furzeri	ENSNFUP00015045687	38.3915	30.5008
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	12.0244	5.17504	eptatretus_burgeri	ENSEBUP00000019715	19.0821	8.21256
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	35.4642	28.1583	esox_lucius	ENSELUP00000078437	34.7761	27.6119
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	36.8341	29.8326	oncorhynchus_kisutch	ENSOKIP00005035663	37.0597	30.0153
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	19.7869	15.8295	oncorhynchus_mykiss	ENSOMYP00000089075	51.7928	41.4343
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	37.5951	30.4414	salmo_salar	ENSSSAP00000121705	36.5926	29.6296
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	29.5282	24.8097	salmo_trutta	ENSSTUP00000070640	47.7833	40.1478
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	35.1598	30.4414	myripristis_murdjan	ENSMMDP00005050901	52.381	45.3515
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	36.2253	29.0715	hucho_hucho	ENSHHUP00000034684	36.3359	29.1603
ENSTRUG00000013414	takifugu_rubripes	ENSTRUP00000034208	36.3775	29.6804	oncorhynchus_tshawytscha	ENSOTSP00005018753	34.9415	28.5088

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression