RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSTRUG00000003459	Gene ID		Accession	-
Symbol	RPL37A	Alias	-	Full Name	zgc:171772
Status	Confidence	Length	1750 bases	Strand	Minus strand
Position	22 : 13045679 - 13047428	RNA binding domain	Ribosomal_L37ae
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSTRUP00000066156	Ribosomal_L37ae	PF01780	1.5e-31	1
ENSTRUP00000008111	Ribosomal_L37ae	PF01780	1.9e-23	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
zgc:171772-201	ENSTRUT00000008159	321	78aa	ENSTRUP00000008111
zgc:171772-202	ENSTRUT00000078934	381	68aa	ENSTRUP00000066156

Gene Model

Click here to download ENSTRUG00000003459's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSTRUG00000003459's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTRUG00000003459

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	64.1026	fundulus_heteroclitus	ENSFHEP00000016949	56.5217	54.3478
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	64.1026	poecilia_reticulata	ENSPREP00000031565	55.3191	53.1915
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	62.8205	oryzias_latipes	ENSORLP00000014370	57.7778	54.4444
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	64.1026	xiphophorus_maculatus	ENSXMAP00000022527	56.5217	54.3478
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	62.8205	cyclopterus_lumpus	ENSCLMP00005030659	55.4348	53.2609
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	64.1026	oreochromis_niloticus	ENSONIP00000032425	76.4706	73.5294
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	64.1026	astatotilapia_calliptera	ENSACLP00000026553	56.5217	54.3478
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	64.1026	haplochromis_burtoni	ENSHBUP00000034754	57.7778	55.5556
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	62.8205	sparus_aurata	ENSSAUP00010064465	56.5217	53.2609
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	62.8205	cyprinodon_variegatus	ENSCVAP00000013185	55.4348	53.2609
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	62.8205	oryzias_melastigma	ENSOMEP00000028375	56.5217	53.2609
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	64.1026	poecilia_latipinna	ENSPLAP00000016918	56.5217	54.3478
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	62.8205	scophthalmus_maximus	ENSSMAP00000021009	54.7368	51.5789
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	64.1026	neolamprologus_brichardi	ENSNBRP00000020778	56.5217	54.3478
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	75.641	65.3846	amphilophus_citrinellus	ENSACIP00000013169	57.2816	49.5146
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	62.8205	oryzias_javanicus	ENSOJAP00000027733	56.5217	53.2609
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	64.1026	maylandia_zebra	ENSMZEP00005014902	57.7778	55.5556
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	62.8205	stegastes_partitus	ENSSPAP00000004318	56.5217	53.2609
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	64.1026	gasterosteus_aculeatus	ENSGACP00000016501	56.5217	54.3478
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	64.1026	pundamilia_nyererei	ENSPNYP00000022426	56.5217	54.3478
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	64.1026	sander_lucioperca	ENSSLUP00000008945	56.5217	54.3478
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	62.8205	oryzias_sinensis	ENSOSIP00000014190	56.5217	53.2609
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	61.5385	kryptolebias_marmoratus	ENSKMAP00000025927	46.3636	43.6364
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	62.8205	acanthochromis_polyacanthus	ENSAPOP00000026370	55.4348	53.2609
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	62.8205	larimichthys_crocea	ENSLCRP00005034140	56.5217	53.2609
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	64.1026	poecilia_formosa	ENSPFOP00000014682	56.5217	54.3478
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	64.1026	61.5385	betta_splendens	ENSBSLP00000050988	54.3478	52.1739
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	64.1026	amphiprion_percula	ENSAPEP00000030792	34.8993	33.557
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	62.8205	mastacembelus_armatus	ENSMAMP00000047072	32.5	30.625
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	64.1026	anabas_testudineus	ENSATEP00000054710	76.4706	73.5294
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	64.1026	cottoperca_gobio	ENSCGOP00000025482	56.5217	54.3478
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	65.3846	cynoglossus_semilaevis	ENSCSEP00000013732	56.5217	55.4348
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	62.8205	hippocampus_comes	ENSHCOP00000011939	55.4348	53.2609
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	62.8205	seriola_dumerili	ENSSDUP00000002450	57.1429	53.8462
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	65.3846	tetraodon_nigroviridis	ENSTNIP00000010730	56.5217	55.4348
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	62.8205	amphiprion_ocellaris	ENSAOCP00000023850	35.3741	33.3333
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	62.8205	seriola_lalandi_dorsalis	ENSSLDP00000005195	56.5217	53.2609
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	62.8205	nothobranchius_furzeri	ENSNFUP00015025358	76.4706	72.0588
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	62.8205	petromyzon_marinus	ENSPMAP00000000001	55.4348	53.2609
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	58.9744	eptatretus_burgeri	ENSEBUP00000008712	41.8033	37.7049
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	64.1026	61.5385	callorhinchus_milii	ENSCMIP00000038383	24.5098	23.5294
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	64.1026	latimeria_chalumnae	ENSLACP00000013146	56.5217	54.3478
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	62.8205	clupea_harengus	ENSCHAP00000043701	47.2222	45.3704
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	60.2564	danio_rerio	ENSDARP00000149337	55.4348	51.087
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	62.8205	carassius_auratus	ENSCARP00000007525	55.4348	53.2609
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	61.5385	carassius_auratus	ENSCARP00000020048	52.0408	48.9796
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	61.5385	carassius_auratus	ENSCARP00000127999	52.0408	48.9796
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	62.8205	57.6923	astyanax_mexicanus	ENSAMXP00000044376	53.2609	48.913
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	61.5385	ictalurus_punctatus	ENSIPUP00000032395	55.4348	52.1739
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	60.2564	electrophorus_electricus	ENSEEEP00000002593	53.6842	49.4737
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	62.8205	esox_lucius	ENSELUP00000034166	55.4348	53.2609
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	62.8205	salmo_salar	ENSSSAP00000168002	11.5385	11.086
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	62.8205	gadus_morhua	ENSGMOP00000047570	55.4348	53.2609
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	60.2564	56.4103	chrysemys_picta_bellii	ENSCPBP00000018679	55.9524	52.381
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	60.2564	56.4103	crocodylus_porosus	ENSCPRP00005027404	64.3836	60.274
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	60.2564	57.6923	anas_platyrhynchos_platyrhynchos	ENSAPLP00000009541	63.5135	60.8108
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	62.8205	sarcophilus_harrisii	ENSSHAP00000041769	45.1327	43.3628
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	55.1282	52.5641	dasypus_novemcinctus	ENSDNOP00000028113	46.7391	44.5652
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	57.6923	55.1282	callithrix_jacchus	ENSCJAP00000064682	56.962	54.4304
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	60.2564	macaca_mulatta	ENSMMUP00000047768	42.5	39.1667
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	67.9487	61.5385	papio_anubis	ENSPANP00000051133	29.4444	26.6667
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	38.4615	35.8974	pan_paniscus	ENSPPAP00000037771	50	46.6667
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	60.2564	58.9744	mandrillus_leucophaeus	ENSMLEP00000019671	53.4091	52.2727
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	48.7179	46.1538	pan_troglodytes	ENSPTRP00000093619	49.3507	46.7532
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	56.4103	51.2821	canis_lupus_familiaris	ENSCAFP00845026247	55.6962	50.6329
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	69.2308	57.6923	canis_lupus_familiaris	ENSCAFP00845016142	58.6957	48.913
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	53.8462	51.2821	canis_lupus_familiaris	ENSCAFP00845025122	53.8462	51.2821
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	71.7949	57.6923	vulpes_vulpes	ENSVVUP00000036984	54.902	44.1176
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	55.1282	51.2821	vulpes_vulpes	ENSVVUP00000034144	58.9041	54.7945
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	55.1282	50	ursus_americanus	ENSUAMP00000013106	54.4304	49.3671
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	64.1026	60.2564	felis_catus	ENSFCAP00000053150	35.7143	33.5714
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	66.6667	62.8205	mustela_putorius_furo	ENSMPUP00000016385	22.4138	21.1207
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	62.8205	ailuropoda_melanoleuca	ENSAMEP00000024358	55.4348	53.2609
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	61.5385	56.4103	delphinapterus_leucas	ENSDLEP00000008765	48.9796	44.898
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	51.2821	47.4359	panthera_leo	ENSPLOP00000022540	57.971	53.6232
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	62.8205	loxodonta_africana	ENSLAFP00000024159	56.044	53.8462
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	61.5385	57.6923	balaenoptera_musculus	ENSBMSP00010030043	44.8598	42.0561
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	51.2821	47.4359	equus_asinus	ENSEASP00005024349	57.1429	52.8571
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	55.1282	51.2821	sus_scrofa	ENSSSCP00000078637	51.8072	48.1928
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	58.9744	55.1282	camelus_dromedarius	ENSCDRP00005016922	51.1111	47.7778
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	58.9744	57.6923	ovis_aries_rambouillet	ENSOARP00020009900	52.8736	51.7241
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	58.9744	57.6923	ovis_aries_rambouillet	ENSOARP00020023040	56.0976	54.878
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	55.1282	52.5641	capra_hircus	ENSCHIP00000017821	54.4304	51.8987
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	58.9744	50	marmota_marmota_marmota	ENSMMMP00000025327	76.6667	65
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	60.2564	56.4103	urocitellus_parryii	ENSUPAP00010008086	77.0492	72.1311
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	62.8205	58.9744	mus_spicilegus	ENSMSIP00000024632	49	46
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	56.4103	55.1282	cavia_porcellus	ENSCPOP00000027907	40.367	39.4495
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	44.8718	43.5897	rattus_norvegicus	ENSRNOP00000085402	59.322	57.6271
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	57.6923	53.8462	octodon_degus	ENSODEP00000013262	75	70
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	55.1282	50	ursus_maritimus	ENSUMAP00000026899	54.4304	49.3671
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	55.1282	48.7179	anolis_carolinensis	ENSACAP00000005447	47.2527	41.7582
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	62.8205	microcebus_murinus	ENSMICP00000038552	53.125	51.0417
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	56.4103	51.2821	monodon_monoceros	ENSMMNP00015028851	58.6667	53.3333
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	60.2564	53.8462	saimiri_boliviensis_boliviensis	ENSSBOP00000025689	55.2941	49.4118
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	55.1282	52.5641	sciurus_vulgaris	ENSSVLP00005018272	54.4304	51.8987
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	62.8205	denticeps_clupeoides	ENSDCDP00000000987	53.125	51.0417
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	55.1282	55.1282	aotus_nancymaae	ENSANAP00000013222	53.75	53.75
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	52.5641	51.2821	moschus_moschiferus	ENSMMSP00000003536	55.4054	54.0541
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	62.8205	60.2564	microtus_ochrogaster	ENSMOCP00000002350	51.0417	48.9583
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	62.8205	55.1282	rhinopithecus_bieti	ENSRBIP00000005006	44.9541	39.4495
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	56.4103	53.8462	rhinopithecus_roxellana	ENSRROP00000035531	78.5714	75
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	60.2564	58.9744	catagonus_wagneri	ENSCWAP00000016301	56.6265	55.4217
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	62.8205	myripristis_murdjan	ENSMMDP00005031860	55.4348	53.2609
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	62.8205	pteropus_vampyrus	ENSPVAP00000005767	56.044	53.8462
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	56.4103	53.8462	nomascus_leucogenys	ENSNLEP00000047088	53.6585	51.2195
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	53.8462	46.1538	peromyscus_maniculatus_bairdii	ENSPEMP00000036937	45.6522	39.1304
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	62.8205	pygocentrus_nattereri	ENSPNAP00000001238	32.2785	31.0127
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	57.6923	55.1282	cyprinus_carpio_carpio	ENSCCRP00000041052	36.2903	34.6774
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	50	47.4359	neovison_vison	ENSNVIP00000021424	48.75	46.25
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	61.5385	sinocyclocheilus_grahami	ENSSGRP00000067018	55.4348	52.1739
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	55.1282	51.2821	naja_naja	ENSNNAP00000006425	53.75	50
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	61.5385	58.9744	phocoena_sinus	ENSPSNP00000025587	45.7143	43.8095
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	69.2308	57.6923	canis_lupus_dingo	ENSCAFP00020009512	58.6957	48.913
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	64.1026	58.9744	oncorhynchus_tshawytscha	ENSOTSP00005012992	76.9231	70.7692
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	65.3846	62.8205	prolemur_simus	ENSPSMP00000035209	53.125	51.0417
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	64.1026	57.6923	leptobrachium_leishanense	ENSLLEP00000007026	25.2525	22.7273
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	53.8462	52.5641	bos_mutus	ENSBMUP00000012828	54.5455	53.2468
ENSTRUG00000003459	takifugu_rubripes	ENSTRUP00000008111	55.1282	51.2821	phascolarctos_cinereus	ENSPCIP00000033960	71.6667	66.6667

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression