Description

Ensembl ID ENSTNIG00000003493 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 822 bases Strand Minus strand
Position Un_random : 59480826 - 59481647 RNA binding domain Calreticulin
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSTNIP00000006081 Calreticulin PF00262 1.8e-65 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSTNIT00000006229 519 173aa ENSTNIP00000006081

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000229330.453625.486tetraodon_nigroviridisENSTNIP0000000608181.502968.2081
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP000000226820.5376340.537634tetraodon_nigroviridisENSTNIP000000060810.5780350.578035
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000001856221.081116.2162tetraodon_nigroviridisENSTNIP0000000608145.086734.6821
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000001794465.384648.7179tetraodon_nigroviridisENSTNIP0000000608129.479821.9653

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608160.115645.0867caenorhabditis_elegansZK632.6a.116.801312.601
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608174.566557.8035drosophila_melanogasterFBpp008480421.322316.5289
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608163.583845.6647drosophila_melanogasterFBpp007346719.298213.8596
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608100ciona_intestinalisENSCINP0000000530000
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608179.190868.7861petromyzon_marinusENSPMAP0000001075221.240318.4496
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608180.924965.896eptatretus_burgeriENSEBUP0000001822230.567724.8908
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608178.612762.4277callorhinchus_miliiENSCMIP0000004814622.479317.8512
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608183.23766.474latimeria_chalumnaeENSLACP0000000271023.263318.5784
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608178.612764.1618xenopus_tropicalisENSXETP0000008902322.934218.7184
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608180.924966.474chrysemys_picta_belliiENSCPBP0000004011421.87517.9688
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608182.65968.2081crocodylus_porosusENSCPRP0000501151322.44918.5243
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608178.612765.896sphenodon_punctatusENSSPUP0000001040423.488819.6891
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608179.190863.0058laticauda_laticaudataENSLLTP0000001707023.06418.3502
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608179.768863.5838notechis_scutatusENSNSUP0000000750724.381619.4346
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608179.768863.0058pseudonaja_textilisENSPTXP0000001423823.232318.3502
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608179.768867.052anas_platyrhynchos_platyrhynchosENSAPLP0000000701321.596218.1534
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608179.190865.896gallus_gallusENSGALP0001001253921.044517.5115
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608178.034765.896meleagris_gallopavoENSMGAP0000000261121.951218.5366
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608179.768866.474serinus_canariaENSSCAP0000001787722.961719.1348
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.878663.0058ornithorhynchus_anatinusENSOANP0000002406921.24617.4121
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608179.768865.896parus_majorENSPMJP0000001034621.800918.0095
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.300661.8497sarcophilus_harrisiiENSSHAP0000000193121.568617.4837
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.300661.2717choloepus_hoffmanniENSCHOP0000000054121.639317.377
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608145.086736.4162notamacropus_eugeniiENSMEUP0000001328114.552211.7537
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.144560.1156dasypus_novemcinctusENSDNOP0000000311721.069716.8558
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608173.988460.1156erinaceus_europaeusENSEEUP0000001019524.951320.2729
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608167.630154.9133echinops_telfairiENSETEP0000000791819.180315.5738
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.722561.8497macaca_fascicularisENSMFAP0000002616821.475417.541
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608174.566560.6936callithrix_jacchusENSCJAP0000007287420.941617.0455
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608172.254357.8035cercocebus_atysENSCATP0000002069020.424816.3399
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.722561.8497macaca_mulattaENSMMUP0000005729621.475417.541
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.722561.8497macaca_nemestrinaENSMNEP0000000609421.475417.541
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.722561.8497mandrillus_leucophaeusENSMLEP0000000401821.475417.541
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608174.566560.6936gorilla_gorillaENSGGOP0000002365121.644317.6174
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608174.566560.1156pan_paniscusENSPPAP0000003515221.147517.0492
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.144561.2717papio_anubisENSPANP0000000656821.311517.377
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608173.988460.6936pongo_abeliiENSPPYP0000001684419.512216.0061
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608174.566560.1156pan_troglodytesENSPTRP0000008730521.147517.0492
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.878661.2717canis_lupus_familiarisENSCAFP0084502951820.336416.208
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.878661.2717vulpes_vulpesENSVVUP0000002929220.336416.208
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608174.566560.1156homo_sapiensENSP0000032669921.147517.0492
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.878662.4277ursus_americanusENSUAMP0000001597029.621424.0535
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.300660.6936mustela_putorius_furoENSMPUP0000001599821.428617.0455
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.878661.2717ailuropoda_melanoleucaENSAMEP0000001150921.696617.292
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.878661.2717felis_catusENSFCAP0000005483320.336416.208
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.878661.2717panthera_leoENSPLOP0000001958721.803317.377
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.878661.2717panthera_pardusENSPPRP0000000608021.803317.377
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.144560.6936tursiops_truncatusENSTTRP0000001012721.311517.2131
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.144560.6936delphinapterus_leucasENSDLEP0000000241521.311517.2131
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.722560.6936balaenoptera_musculusENSBMSP0001000256321.475417.2131
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.722561.2717loxodonta_africanaENSLAFP0000001515021.335517.2638
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.300660.6936equus_asinusENSEASP0000501114721.290316.9355
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.722561.2717physeter_catodonENSPCTP0000500146721.475417.377
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608177.456661.8497sus_scrofaENSSSCP0000002617921.967217.541
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.878660.6936equus_caballusENSECAP0000004335021.314116.8269
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.878660.6936equus_caballusENSECAP0000003059121.314116.8269
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.878660.6936equus_caballusENSECAP0000002836821.314116.8269
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608169.364257.2254procavia_capensisENSPCAP0000000468119.704416.2562
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.300662.4277bos_taurusENSBTAP0000000207121.782217.8218
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608178.034763.0058camelus_dromedariusENSCDRP0000500169522.131117.8689
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.722561.8497ovis_aries_rambouilletENSOARP0002001695621.617217.6568
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.722560.1156oryctolagus_cuniculusENSOCUP0000000570320.21616.0494
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.722561.8497capra_hircusENSCHIP0000001401821.617217.6568
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.878662.4277marmota_marmota_marmotaENSMMMP0000001696236.842129.9169
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608178.034763.5838urocitellus_parryiiENSUPAP0001001517322.058817.9739
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608178.612760.1156cricetulus_griseus_chok1gshdENSCGRP0000101688822.149816.9381
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.878657.8035dipodomys_ordiiENSDORP0000000015921.767616.3666
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608143.352633.526ochotona_princepsENSOPRP0000000420412.29519.5082
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608178.034760.1156mesocricetus_auratusENSMAUP0000002117322.022816.9657
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.300660.1156mus_musculusENSMUSP0000000225921.603917.0213
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP000000060819.826594.04624mus_caroliMGP_CAROLIEiJ_P00851443.281851.35135
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.300660.1156mus_spretusMGP_SPRETEiJ_P008865021.603917.0213
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.722560.6936mus_pahariMGP_PahariEiJ_P005344421.475417.2131
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.144558.9595mus_spicilegusENSMSIP0000001334720.186315.8385
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608174.566557.8035cavia_porcellusENSCPOP0000000628121.60816.7504
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608174.566559.5376rattus_norvegicusENSRNOP0000000507121.078416.8301
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.144561.8497monodelphis_domesticaENSMODP0000000018621.416817.6277
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.722560.1156octodon_degusENSODEP0000000363526.095620.7171
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.144557.2254heterocephalus_glaber_femaleENSHGLP0000000013221.346516.2562
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608166.47453.1792erpetoichthys_calabaricusENSECRP0000001415038.851431.0811
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608182.65967.6301erpetoichthys_calabaricusENSECRP0000000188022.770718.6306
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608178.612764.1618anolis_carolinensisENSACAP0000000227422.97318.75
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.878661.2717ursus_maritimusENSUMAP0000002059821.696617.292
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.878662.4277bos_grunniensENSBGRP0000003540821.947217.8218
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.300662.4277bos_indicus_hybridENSBIXP0000500324121.782217.8218
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.144561.2717vombatus_ursinusENSVURP0001001279321.848717.8151
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608178.034762.4277vicugna_pacosENSVPAP0000000643922.131117.7049
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608177.456661.2717microcebus_murinusENSMICP0000000644522.003317.4056
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.300661.2717otolemur_garnettiiENSOGAP0000001110325.047420.1139
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608179.190863.0058naja_najaENSNNAP0000001893022.986618.2886
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608173.410458.3815chinchilla_lanigeraENSCLAP0000001049220.888216.6118
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608174.566561.2717aotus_nancymaaeENSANAP0000002898221.976218.0579
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.144561.8497phascolarctos_cinereusENSPCIP0000000552921.138217.3984
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608133.52627.7457tupaia_belangeriENSTBEP000000013139.948548.23328
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608174.566561.2717saimiri_boliviensis_boliviensisENSSBOP0000002890521.147517.377
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.144560.6936phocoena_sinusENSPSNP0000002149121.311517.2131
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608171.676360.1156sorex_araneusENSSARP0000000001321.052617.657
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.144560.6936monodon_monocerosENSMMNP0001501772621.311517.2131
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608178.034763.5838ictidomys_tridecemlineatusENSSTOP0000000273522.058817.9739
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.878662.4277bison_bison_bisonENSBBBP0000000276722.81318.5249
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608179.768865.896geospiza_fortisENSGFOP0000000698321.495317.757
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608167.05252.6012ciona_savignyiENSCSAVP0000001632724.576319.2797
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.144561.8497sciurus_vulgarisENSSVLP0000500934421.241817.4837
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608177.456661.8497catagonus_wagneriENSCWAP0000002826921.967217.541
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608178.612764.1618myotis_lucifugusENSMLUP0000001282222.295118.1967
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608180.346867.052ficedula_albicollisENSFALP0000000510521.617418.0404
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.722561.8497chlorocebus_sabaeusENSCSAP0000001453021.475417.541
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.144560.6936rhinopithecus_roxellanaENSRROP0000000715321.311517.2131
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.144560.6936rhinopithecus_bietiENSRBIP0000002484921.311517.2131
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.722560.6936nomascus_leucogenysENSNLEP0000003471021.300817.0732
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.878662.4277bos_mutusENSBMUP0000001490621.947217.8218
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.878661.2717panthera_tigris_altaicaENSPTIP0000000375421.803317.377
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.878661.8497moschus_moschiferusENSMMSP0000000239121.87517.5987
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608180.346865.896podarcis_muralisENSPMRP0000001183219.971316.3793
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608179.190865.3179coturnix_japonicaENSCJPP0000500140422.349118.4339
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608180.346867.052leptobrachium_leishanenseENSLLEP0000000542622.712418.9542
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608181.502967.6301aquila_chrysaetos_chrysaetosENSACCP0002000669622.169818.3962
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.300661.8497cervus_hanglu_yarkandensisENSCHYP0000000024421.1217.12
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608179.768864.7399salvator_merianaeENSSMRP0000002503424.598919.9643
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608180.346865.3179gopherus_evgoodeiENSGEVP0000501406221.752717.6839
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.878661.2717canis_lupus_dingoENSCAFP0002002657122.129817.6373
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608180.346865.896terrapene_carolina_triunguisENSTMTP0000001917724.300719.9301
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.144561.8497pteropus_vampyrusENSPVAP0000001582821.311517.541
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.144561.2717propithecus_coquereliENSPCOP0000000517325.291820.6226
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.300659.5376peromyscus_maniculatus_bairdiiENSPEMP0000002725429.01122.6374
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608181.502967.6301struthio_camelus_australisENSSCUP0000002262822.031218.2812
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608179.768867.052anser_brachyrhynchusENSABRP0000001595027.165422.8346
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608180.924965.896strigops_habroptilaENSSHBP0000502327923.102318.8119
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.300660.6936neovison_visonENSNVIP0000002565821.639317.2131
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608175.144561.2717carlito_syrichtaENSTSYP0000001083821.346517.4056
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.300658.9595nannospalax_galiliENSNGAP0000001118521.639316.7213
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608148.554932.3699saccharomyces_cerevisiaeYAL058W16.733111.1554
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608180.924967.6301chelonoidis_abingdoniiENSCABP0000002450323.728819.8305
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608174.566561.2717cebus_imitatorENSCCAP0000000401121.147517.377
ENSTNIG00000003493tetraodon_nigroviridisENSTNIP0000000608176.878659.5376microtus_ochrogasterENSMOCP0000001817521.73216.8301

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression