RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSTNIG00000001634	Gene ID		Accession	-
Symbol	rnaset2l	Alias	-	Full Name	ribonuclease T2, like
Status	Confidence	Length	1017 bases	Strand	Plus strand
Position	Un_random : 92143938 - 92144954	RNA binding domain	Ribonuclease_T2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSTNIP00000003987	Ribonuclease_T2	PF00445	8.4e-33	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
rnaset2l-201	ENSTNIT00000003326	582	193aa	ENSTNIP00000003987

Gene Model

Click here to download ENSTNIG00000001634's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSTNIG00000001634's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000016803	34.4398	23.6515	tetraodon_nigroviridis	ENSTNIP00000003987	43.0052	29.5337

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	65.285	55.9585	fundulus_heteroclitus	ENSFHEP00000011041	43.1507	36.9863
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	67.8756	54.9223	poecilia_reticulata	ENSPREP00000009821	48.6989	39.4052
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	65.8031	55.4404	xiphophorus_maculatus	ENSXMAP00000033977	36.8116	31.0145
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	64.7668	51.2953	oryzias_latipes	ENSORLP00000030607	46.6418	36.9403
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	70.4663	56.4767	oreochromis_niloticus	ENSONIP00000001389	41.9753	33.642
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	72.5389	61.1399	cyclopterus_lumpus	ENSCLMP00005009064	52.0446	43.8662
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	69.4301	55.9585	astatotilapia_calliptera	ENSACLP00000016251	49.6296	40
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	70.9845	62.1762	dicentrarchus_labrax	ENSDLAP00005028561	49.4585	43.3213
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	70.9845	58.0311	sparus_aurata	ENSSAUP00010000252	51.3109	41.9476
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	70.4663	58.5492	cyprinodon_variegatus	ENSCVAP00000023834	48.0565	39.9293
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	66.3212	54.4041	oryzias_melastigma	ENSOMEP00000018050	45.0704	36.9718
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	55.9585	46.6321	seriola_dumerili	ENSSDUP00000019915	50.9434	42.4528
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	66.8394	54.9223	takifugu_rubripes	ENSTRUP00000056156	60.2804	49.5327
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	66.8394	54.4041	neolamprologus_brichardi	ENSNBRP00000006359	50.5882	41.1765
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	66.8394	56.4767	poecilia_formosa	ENSPFOP00000000627	47.6015	40.2214
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	68.3938	54.4041	scophthalmus_maximus	ENSSMAP00000007625	44.898	35.7143
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	70.4663	56.9948	labrus_bergylta	ENSLBEP00000021073	60.4444	48.8889
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	41.4508	36.2694	acanthochromis_polyacanthus	ENSAPOP00000010540	45.4545	39.7727
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	62.6943	50.2591	hippocampus_comes	ENSHCOP00000019535	32.0955	25.7294
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	69.4301	55.9585	maylandia_zebra	ENSMZEP00005000039	49.6296	40
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	73.057	60.6218	stegastes_partitus	ENSSPAP00000013739	51.6483	42.8571
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	55.9585	46.114	seriola_lalandi_dorsalis	ENSSLDP00000010388	49.7696	41.0138
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	66.8394	54.4041	pundamilia_nyererei	ENSPNYP00000012241	52.6531	42.8571
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	72.5389	61.1399	amphiprion_percula	ENSAPEP00000029783	51.4706	43.3824
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	71.5026	60.1036	cottoperca_gobio	ENSCGOP00000032239	52.0755	43.7736
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	68.3938	58.0311	mastacembelus_armatus	ENSMAMP00000029409	50.1901	42.5856
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	66.3212	53.886	oryzias_javanicus	ENSOJAP00000011088	47.7612	38.806
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	65.285	52.3316	cynoglossus_semilaevis	ENSCSEP00000024634	49.6063	39.7638
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	73.057	60.1036	larimichthys_crocea	ENSLCRP00005020015	45.1923	37.1795
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	56.9948	48.7047	amphiprion_ocellaris	ENSAOCP00000027366	53.9216	46.0784
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	69.9482	55.9585	anabas_testudineus	ENSATEP00000003894	50.9434	40.7547
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	40.4145	27.9793	caenorhabditis_elegans	K10C9.3.1	27.957	19.3548
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	66.8394	55.4404	poecilia_latipinna	ENSPLAP00000025800	47.6015	39.4834
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	45.0777	28.4974	drosophila_melanogaster	FBpp0076469	26.7692	16.9231
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	46.114	30.5699	ciona_intestinalis	ENSCINP00000030837	36.0324	23.8866
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	29.5337	16.5803	callorhinchus_milii	ENSCMIP00000009331	36.5385	20.5128
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	52.8497	42.487	lepisosteus_oculatus	ENSLOCP00000018088	59.6491	47.9532
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	52.8497	38.8601	danio_rerio	ENSDARP00000075733	44.5415	32.7511
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	55.9585	38.342	carassius_auratus	ENSCARP00000048400	41.3793	28.3525
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	59.0674	41.4508	astyanax_mexicanus	ENSAMXP00000037728	43.1818	30.303
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	60.6218	44.0415	ictalurus_punctatus	ENSIPUP00000010988	45	32.6923
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	58.5492	43.5233	electrophorus_electricus	ENSEEEP00000052412	42.9658	31.9392
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	58.0311	47.6684	esox_lucius	ENSELUP00000033276	42.4242	34.8485
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	58.5492	49.2228	oncorhynchus_kisutch	ENSOKIP00005074274	44.3137	37.2549
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	59.0674	50.2591	oncorhynchus_kisutch	ENSOKIP00005087760	43.6782	37.1647
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	59.5855	49.2228	oncorhynchus_mykiss	ENSOMYP00000097403	44.5736	36.8217
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	60.6218	51.8135	oncorhynchus_mykiss	ENSOMYP00000056155	42.8571	36.63
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	59.5855	50.2591	salmo_salar	ENSSSAP00000047267	44.0613	37.1647
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	59.5855	50.2591	salmo_trutta	ENSSTUP00000010337	44.0613	37.1647
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	60.6218	46.6321	gadus_morhua	ENSGMOP00000057549	43.6567	33.5821
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	49.7409	36.2694	chrysemys_picta_bellii	ENSCPBP00000008880	39.3443	28.6885
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	49.7409	37.3057	sphenodon_punctatus	ENSSPUP00000015219	39.6694	29.7521
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	54.4041	41.4508	erpetoichthys_calabaricus	ENSECRP00000026586	41.6667	31.746
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	48.1865	31.6062	anolis_carolinensis	ENSACAP00000037043	31.5254	20.678
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	49.7409	36.2694	naja_naja	ENSNNAP00000026144	38.0952	27.7778
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	53.886	40.4145	pygocentrus_nattereri	ENSPNAP00000004506	46.6368	34.9776
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	46.114	30.0518	ciona_savignyi	ENSCSAVP00000011340	33.7121	21.9697
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	54.9223	45.0777	hucho_hucho	ENSHHUP00000084491	39.1144	32.1033
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	59.0674	49.7409	oncorhynchus_tshawytscha	ENSOTSP00005039545	43.6782	36.7816
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	58.5492	49.2228	oncorhynchus_tshawytscha	ENSOTSP00005034531	44.3137	37.2549
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	52.3316	37.8238	podarcis_muralis	ENSPMRP00000021684	39.6078	28.6275
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	56.4767	41.4508	sinocyclocheilus_grahami	ENSSGRP00000021030	42.7451	31.3725
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	51.8135	37.3057	salvator_merianae	ENSSMRP00000019713	40	28.8
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	50.7772	37.8238	gopherus_evgoodei	ENSGEVP00005008151	40.1639	29.918
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	56.4767	39.8964	cyprinus_carpio_carpio	ENSCCRP00000119027	41.7625	29.5019
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	37.3057	25.9067	saccharomyces_cerevisiae	YPL123C	16.5899	11.5207
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	56.4767	44.0415	paramormyrops_kingsleyae	ENSPKIP00000022051	42.7451	33.3333
ENSTNIG00000001634	tetraodon_nigroviridis	ENSTNIP00000003987	53.3679	41.4508	denticeps_clupeoides	ENSDCDP00000012775	39.313	30.5344

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression