RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSTMTG00000023120	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	670 bases	Strand	Minus strand
Position	PRFB02000113.1 : 19200781 - 19201450	RNA binding domain	Ribosomal_L36e
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSTMTP00000032331	Ribosomal_L36e	PF01158	4.8e-12	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSTMTT00000033484	243	80aa	ENSTMTP00000032331

Gene Model

Click here to download ENSTMTG00000023120's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSTMTG00000023120's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTMTG00000023120

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTMTG00000023120	terrapene_carolina_triunguis	ENSTMTP00000032331	58.75	57.5	chrysemys_picta_bellii	ENSCPBP00000010553	74.6032	73.0159
ENSTMTG00000023120	terrapene_carolina_triunguis	ENSTMTP00000032331	70	67.5	gopherus_evgoodei	ENSGEVP00005004324	69.1358	66.6667

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression