Description

Ensembl ID ENSTMTG00000020448 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 144252 bases Strand Plus strand
Position PRFB02033716.1 : 1684299 - 1828550 RNA binding domain R3H , SUZ
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSTMTP00000028242 R3H PF01424 6e-12 1
ENSTMTP00000028223 R3H PF01424 7.1e-12 1
ENSTMTP00000028223 SUZ PF12752 1.8e-12 2
ENSTMTP00000028228 R3H PF01424 7.3e-12 1
ENSTMTP00000028253 R3H PF01424 7.5e-12 1
ENSTMTP00000028253 SUZ PF12752 1.7e-12 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSTMTT00000029254 2352 783aa ENSTMTP00000028223
- ENSTMTT00000029259 2346 781aa ENSTMTP00000028228
- ENSTMTT00000029275 1698 565aa ENSTMTP00000028242
- ENSTMTT00000029284 2304 767aa ENSTMTP00000028253

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002026849.577536.9953terrapene_carolina_triunguisENSTMTP0000002822367.43350.3193
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000001572643.47432.6791terrapene_carolina_triunguisENSTMTP0000002822356.577342.5287
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000003176895.153194.898terrapene_carolina_triunguisENSTMTP0000002822395.274695.0192

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822329.374217.3691caenorhabditis_elegansZK121.2.141.218624.3728
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822316.858210.6003ciona_intestinalisENSCINP0000003087567.692342.5641
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822344.18928.6079drosophila_melanogasterFBpp030541017.816711.5345
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822333.46120.1788eptatretus_burgeriENSEBUP0000001700131.719119.1283
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822386.334677.5223callorhinchus_miliiENSCMIP0000003067580.094871.9194
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822363.090757.4713latimeria_chalumnaeENSLACP0000000760273.185266.6667
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822381.992371.1367lepisosteus_oculatusENSLOCP0000000569876.978466.7866
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822321.583710.8557oncorhynchus_mykissENSOMYP000001299399.45194.75391
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822397.062696.2963chrysemys_picta_belliiENSCPBP0000001854988.681487.9813
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822385.568382.8863crocodylus_porosusENSCPRP0000501317386.675383.9586
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822380.842978.4163sphenodon_punctatusENSSPUP0000000948391.34288.6003
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822393.486689.272anas_platyrhynchos_platyrhynchosENSAPLP0000003200585.414281.5636
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822393.869789.7829gallus_gallusENSGALP0001002642284.482880.8046
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822393.869789.9106meleagris_gallopavoENSMGAP0000001250184.482880.9195
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822393.103489.3997serinus_canariaENSSCAP0000001429785.663982.2562
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822393.358990.0383parus_majorENSPMJP0000001561784.411181.4088
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822373.818664.3678notamacropus_eugeniiENSMEUP0000000300171.094761.9926
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822386.206977.7778choloepus_hoffmanniENSCHOP0000000741883.333375.1852
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822344.444441.8902ornithorhynchus_anatinusENSOANP0000000217680.930276.2791
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP000000282235.49174.85313ornithorhynchus_anatinusENSOANP0000004616747.777842.2222
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822383.524974.3295sarcophilus_harrisiiENSSHAP0000002955578.323469.7006
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822386.462377.6501dasypus_novemcinctusENSDNOP0000001152180.023671.8676
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822370.242761.175echinops_telfairiENSETEP0000001259667.73458.9901
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822386.5978.0332callithrix_jacchusENSCJAP0000002260580.522672.5653
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822387.100979.3103cercocebus_atysENSCATP0000001632480.614773.4043
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822387.228679.3103macaca_mulattaENSMMUP0000002099480.637573.3176
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822363.218457.3436erinaceus_europaeusENSEEUP0000001434461.035855.3637
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822387.228679.3103macaca_nemestrinaENSMNEP0000004260480.637573.3176
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822387.100979.0549papio_anubisENSPANP0000000844280.519573.0815
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822387.228679.4381macaca_fascicularisENSMFAP0000002903678.23671.2486
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822382.886375.0958mandrillus_leucophaeusENSMLEP0000001492279.827872.3247
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822382.886374.9681gorilla_gorillaENSGGOP0000000913279.827872.2017
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822383.01475.0958pan_paniscusENSPPAP0000001950079.950872.3247
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822387.100979.0549pan_troglodytesENSPTRP0000002541780.519573.0815
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822385.312976.5006canis_lupus_familiarisENSCAFP0084503508379.053370.8876
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822387.228679.0549homo_sapiensENSP0000050692280.637573.0815
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822387.356379.1826pongo_abeliiENSPPYP0000001568984.236576.3547
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822385.69677.1392vulpes_vulpesENSVVUP0000003010079.408371.4793
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP000000282235.363984.08685ursus_americanusENSUAMP0000002367747.19135.9551
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822344.444439.2082ursus_americanusENSUAMP0000002367679.633970.2517
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822385.312976.1175mustela_putorius_furoENSMPUP0000000294279.053370.5325
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822385.69676.8838ailuropoda_melanoleucaENSAMEP0000002286779.314471.1584
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822385.057576.7561felis_catusENSFCAP0000001241982.120874.106
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822381.864673.1801panthera_pardusENSPPRP0000001327079.038270.6535
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822386.845577.0115delphinapterus_leucasENSDLEP0000001493980.378371.2766
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822381.864673.0524panthera_leoENSPLOP0000000971079.038270.5302
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822382.630972.9247physeter_catodonENSPCTP0000500900479.679870.3202
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822371.647563.2184tursiops_truncatusENSTTRP0000000290069.689461.4907
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822382.247872.7969balaenoptera_musculusENSBMSP0001003123579.310370.197
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822387.356378.6718equus_asinusENSEASP0000501032780.851172.8132
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822384.163574.9681loxodonta_africanaENSLAFP0000001981480.958272.113
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822375.734466.2835procavia_capensisENSPCAP0000001032873.300464.1533
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822387.48478.7995equus_caballusENSECAP0000002061380.873772.8453
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822385.69676.8838camelus_dromedariusENSCDRP0000502008880.359372.0958
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822384.546674.8404sus_scrofaENSSSCP0000001198682.957473.4336
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822385.823876.1175bos_taurusENSBTAP0000006268980.190971.1217
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822385.185275.3512capra_hircusENSCHIP0000001262382.549573.0198
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822368.199261.5581ochotona_princepsENSOPRP0000000944368.549461.8742
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822386.079277.9055oryctolagus_cuniculusENSOCUP0000004977379.763372.1893
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822382.630973.6909marmota_marmota_marmotaENSMMMP0000001381779.581870.9717
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822385.69676.1175ovis_aries_rambouilletENSOARP0002003337783.250673.9454
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822386.717877.9055urocitellus_parryiiENSUPAP0001000615880.165372.0189
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822378.927269.4764cricetulus_griseus_chok1gshdENSCGRP0000101028676.485167.3267
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822380.587571.3921dipodomys_ordiiENSDORP0000001628177.901269.0123
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822379.948969.2209mesocricetus_auratusENSMAUP0000002503877.093666.7488
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822379.310368.9655mus_musculusENSMUSP0000010750376.761466.7491
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822379.182669.3487mus_caroliMGP_CAROLIEiJ_P009040376.637867.1199
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822379.438169.4764mus_pahariMGP_PahariEiJ_P002607976.88567.2435
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822378.927268.8378mus_spretusMGP_SPRETEiJ_P009413476.390666.6255
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822379.182668.9655mus_spicilegusENSMSIP0000003395676.637866.7491
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822383.652673.6909rattus_norvegicusENSRNOP0000006966177.698768.446
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822382.1273.5632octodon_degusENSODEP0000000560479.187270.936
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822386.717878.0332heterocephalus_glaber_femaleENSHGLP0000000175580.2672.2222
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822386.5977.1392cavia_porcellusENSCPOP0000003297680.236771.4793
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822396.296394.7637pelodiscus_sinensisENSPSIP0000001033788.497787.0892
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822362.324451.341erpetoichthys_calabaricusENSECRP0000002960380.661266.4463
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822380.842970.3704monodelphis_domesticaENSMODP0000000281576.173366.3057
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822390.549285.3129anolis_carolinensisENSACAP0000001005885.62880.6763
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822384.80275.9898ursus_maritimusENSUMAP0000000862179.616371.3429
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822385.951576.2452bos_grunniensENSBGRP0000002789080.310371.2411
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP000000282235.236274.21456vombatus_ursinusENSVURP0001002383547.126437.931
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822338.186534.0996vombatus_ursinusENSVURP0001002375379.946571.3904
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822385.823876.1175bos_indicus_hybridENSBIXP0000501728180.190971.1217
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822386.845578.6718microcebus_murinusENSMICP0000005148680.378372.8132
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822382.886375.0958otolemur_garnettiiENSOGAP0000000867579.926172.4138
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822374.201866.6667vicugna_pacosENSVPAP0000001168572.263764.9254
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822386.334677.9055chinchilla_lanigeraENSCLAP0000001124779.905472.104
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822354.533848.659tupaia_belangeriENSTBEP0000000317552.65146.979
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822387.100978.2886aotus_nancymaaeENSANAP0000003533684.093775.5857
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822383.141873.8186phascolarctos_cinereusENSPCIP0000001352778.433769.6386
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822382.503272.6692monodon_monocerosENSMMNP0001502230679.556670.0739
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822386.973278.1609saimiri_boliviensis_boliviensisENSSBOP0000002603180.687272.5118
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822382.503273.8186ictidomys_tridecemlineatusENSSTOP0000002879779.458871.0947
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822382.630972.7969phocoena_sinusENSPSNP0000002929279.679870.197
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822385.568375.9898bison_bison_bisonENSBBBP0000001129983.126573.8213
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822374.584966.4112sorex_araneusENSSARP0000000726872.456664.5161
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822393.231289.7829geospiza_fortisENSGFOP0000001858584.393181.2717
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822379.821269.8595jaculus_jaculusENSJJAP0000001727977.255967.6143
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822386.206976.7561catagonus_wagneriENSCWAP0000002708483.436374.2892
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822316.0929.32312ciona_savignyiENSCSAVP0000001018246.153826.7399
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822382.503273.9464sciurus_vulgarisENSSVLP0000501935979.556671.3054
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822386.334677.1392myotis_lucifugusENSMLUP0000001231783.456874.5679
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822392.84889.3997taeniopygia_guttataENSTGUP0000003227285.328682.1596
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822381.864673.1801rhinolophus_ferrumequinumENSRFEP0001003292879.331770.9158
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822387.100978.9272chlorocebus_sabaeusENSCSAP0000000557580.614773.0496
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822386.206983.1418ficedula_albicollisENSFALP0000002193987.322184.2173
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822387.100979.0549rhinopithecus_roxellanaENSRROP0000002737280.519573.0815
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822381.609273.0524rhinopithecus_bietiENSRBIP0000000081579.477671.1443
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822390.804686.59podarcis_muralisENSPMRP0000002873585.047881.1005
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822381.481572.1584moschus_moschiferusENSMMSP0000003270379.058270.0124
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822379.821271.9029nomascus_leucogenysENSNLEP0000000586579.821271.9029
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822381.736973.0524panthera_tigris_altaicaENSPTIP0000000290178.914970.5302
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822385.823876.2452bos_mutusENSBMUP0000002642880.190971.2411
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822390.932387.1009coturnix_japonicaENSCJPP0000501814185.167581.5789
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822385.69675.2235cervus_hanglu_yarkandensisENSCHYP0000003571279.78670.0357
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822385.951581.8646salvator_merianaeENSSMRP0000000737987.630283.4635
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP000000282235.236273.83142microtus_ochrogasterENSMOCP0000000506547.126434.4828
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822376.756163.6015scleropages_formosusENSSFOP0001505179670.872658.7264
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822385.312977.1392pteropus_vampyrusENSPVAP0000001508982.469174.5679
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822349.169948.4036chelonoidis_abingdoniiENSCABP0000003123196.2594.75
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822393.358988.8889anser_brachyrhynchusENSABRP0000001459385.697581.5944
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822394.125290.9323aquila_chrysaetos_chrysaetosENSACCP0002000166984.712681.8391
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822384.418975.7344canis_lupus_dingoENSCAFP0002000196282.728474.2178
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822379.182669.8595peromyscus_maniculatus_bairdiiENSPEMP0000000793076.637867.6143
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822382.375574.5849prolemur_simusENSPSMP0000001499579.433571.9212
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822386.5983.1418struthio_camelus_australisENSSCUP0000002119185.714382.3009
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822381.353872.5415neovison_visonENSNVIP0000001013578.64270.1235
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822397.190396.424gopherus_evgoodeiENSGEVP0000501043996.942796.1783
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822366.53960.281carlito_syrichtaENSTSYP0000002050076.843769.6165
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP000000282235.363984.08685nannospalax_galiliENSNGAP0000001534847.727336.3636
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822382.1274.3295propithecus_coquereliENSPCOP0000001349479.187271.6749
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822375.862162.4521paramormyrops_kingsleyaeENSPKIP0000002982970.212857.8014
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822384.674381.3538strigops_habroptilaENSSHBP0000502131585.548482.1936
ENSTMTG00000020448terrapene_carolina_triunguisENSTMTP0000002822386.973278.6718cebus_imitatorENSCCAP0000002986183.86775.8621

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression