RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSTMTG00000013297	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	927 bases	Strand	Plus strand
Position	PRFB02041479.1 : 3778 - 4704	RNA binding domain	RNase_H
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSTMTP00000018059	RNase_H	PF00075	7.7e-25	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSTMTT00000018704	927	309aa	ENSTMTP00000018059

Gene Model

Click here to download ENSTMTG00000013297's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSTMTG00000013297's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000025736	100	100	terrapene_carolina_triunguis	ENSTMTP00000018059	100	100
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000016122	96.875	95.1389	terrapene_carolina_triunguis	ENSTMTP00000018059	90.2913	88.6731
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000016153	96.875	95.1389	terrapene_carolina_triunguis	ENSTMTP00000018059	90.2913	88.6731
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000016519	82.4451	75.8621	terrapene_carolina_triunguis	ENSTMTP00000018059	85.1133	78.3172
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000014612	51.312	47.5219	terrapene_carolina_triunguis	ENSTMTP00000018059	56.9579	52.7508
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000016926	82.4451	75.8621	terrapene_carolina_triunguis	ENSTMTP00000018059	85.1133	78.3172
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000017848	17.0103	13.7457	terrapene_carolina_triunguis	ENSTMTP00000018059	64.0777	51.7799

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	55.9871	41.1003	eptatretus_burgeri	ENSEBUP00000005477	41.4868	30.4556
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	57.9288	42.0712	astyanax_mexicanus	ENSAMXP00000039342	15.1182	10.9797
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	49.1909	34.6278	esox_lucius	ENSELUP00000054143	22.6528	15.9463
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	49.5146	33.9806	esox_lucius	ENSELUP00000066957	15.3924	10.5634
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	48.5437	36.5696	oncorhynchus_kisutch	ENSOKIP00005073282	12.8645	9.69125
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	48.8673	36.8932	oncorhynchus_kisutch	ENSOKIP00005002659	11.8246	8.92717
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	48.8673	36.5696	oncorhynchus_kisutch	ENSOKIP00005082230	11.8898	8.89764
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	49.5146	36.246	oncorhynchus_mykiss	ENSOMYP00000127409	11.9159	8.72274
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	47.8964	33.657	salmo_salar	ENSSSAP00000180019	16.3898	11.5172
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	49.5146	35.2751	gadus_morhua	ENSGMOP00000023455	12.0094	8.55573
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	49.1909	34.9515	gadus_morhua	ENSGMOP00000025338	10.7118	7.61099
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	49.5146	34.6278	gadus_morhua	ENSGMOP00000028123	10.5956	7.40997
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	50.4854	35.9223	xiphophorus_maculatus	ENSXMAP00000041458	16.5079	11.746
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	48.8673	32.3625	oreochromis_niloticus	ENSONIP00000077753	15.8447	10.4932
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	50.4854	34.6278	oreochromis_niloticus	ENSONIP00000026887	11.2473	7.71449
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	50.8091	35.2751	oreochromis_niloticus	ENSONIP00000044713	11.9665	8.30793
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	50.4854	34.9515	oreochromis_niloticus	ENSONIP00000050297	15.8376	10.9645
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	48.8673	33.657	oreochromis_niloticus	ENSONIP00000035584	14.6602	10.0971
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	50.4854	33.9806	oreochromis_niloticus	ENSONIP00000044539	13.6245	9.17031
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	50.1618	34.6278	oreochromis_niloticus	ENSONIP00000067714	11.1511	7.69784
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	50.4854	34.9515	oreochromis_niloticus	ENSONIP00000027841	17.6271	12.2034
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	50.4854	33.9806	oreochromis_niloticus	ENSONIP00000043786	11.2473	7.5703
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	50.8091	33.657	oreochromis_niloticus	ENSONIP00000079894	15.8266	10.4839
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	50.8091	33.657	oreochromis_niloticus	ENSONIP00000031203	15.5138	10.2767
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	50.4854	33.9806	oreochromis_niloticus	ENSONIP00000080199	11.2069	7.5431
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	51.1327	35.9223	oreochromis_niloticus	ENSONIP00000081271	12.8143	9.00243
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	50.4854	33.9806	oreochromis_niloticus	ENSONIP00000066290	15.9509	10.7362
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	50.4854	33.9806	oreochromis_niloticus	ENSONIP00000038629	13.6722	9.20245
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	50.8091	33.9806	oreochromis_niloticus	ENSONIP00000066559	15.5138	10.3755
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	50.4854	34.3042	oreochromis_niloticus	ENSONIP00000058451	15.6156	10.6106
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	50.1618	34.9515	oreochromis_niloticus	ENSONIP00000048127	16.0622	11.1917
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	51.7799	35.5987	oreochromis_niloticus	ENSONIP00000056320	16.7364	11.5063
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	51.1327	35.5987	oreochromis_niloticus	ENSONIP00000061925	11.3915	7.93079
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	50.4854	34.3042	astatotilapia_calliptera	ENSACLP00000034005	12.6521	8.59692
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	50.1618	33.9806	astatotilapia_calliptera	ENSACLP00000009161	11.1833	7.57576
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	87.3786	82.8479	chrysemys_picta_bellii	ENSCPBP00000005659	89.404	84.7682
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	43.0421	27.1845	anas_platyrhynchos_platyrhynchos	ENSAPLP00000027283	11.2331	7.09459
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	40.4531	27.8317	parus_major	ENSPMJP00000022706	10.5485	7.25738
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	74.4337	59.2233	callithrix_jacchus	ENSCJAP00000075811	19.879	15.8168
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	61.165	45.9547	callithrix_jacchus	ENSCJAP00000078223	16.9355	12.724
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	62.1359	45.6311	callithrix_jacchus	ENSCJAP00000078432	16.4524	12.0823
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	63.4304	46.6019	callithrix_jacchus	ENSCJAP00000083121	20.8955	15.3518
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	59.8706	43.6893	callithrix_jacchus	ENSCJAP00000082968	26.8116	19.5652
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	61.8123	45.3074	callithrix_jacchus	ENSCJAP00000072396	17.13	12.5561
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	66.9903	48.2201	macaca_mulatta	ENSMMUP00000080343	18.6151	13.3993
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	67.3139	48.5437	macaca_mulatta	ENSMMUP00000072364	17.8388	12.8645
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	66.9903	48.5437	macaca_mulatta	ENSMMUP00000071095	18.6151	13.4892
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	67.3139	48.2201	macaca_mulatta	ENSMMUP00000080589	18.6213	13.3393
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	66.6667	47.8964	macaca_mulatta	ENSMMUP00000063903	18.4423	13.2498
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	66.0194	47.5728	macaca_mulatta	ENSMMUP00000072339	19.8444	14.2996
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	67.9612	48.5437	macaca_mulatta	ENSMMUP00000078227	21	15
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	66.0194	46.9256	macaca_mulatta	ENSMMUP00000065736	22.2465	15.8124
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	66.0194	47.5728	macaca_mulatta	ENSMMUP00000081125	23.0248	16.5914
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	70.8738	52.4272	macaca_mulatta	ENSMMUP00000069153	19.5886	14.4902
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	67.6375	48.2201	macaca_mulatta	ENSMMUP00000063581	18.7108	13.3393
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	66.6667	47.8964	macaca_mulatta	ENSMMUP00000069058	21.6159	15.5299
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	66.9903	48.2201	macaca_mulatta	ENSMMUP00000079793	17.6772	12.7242
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	66.0194	47.5728	papio_anubis	ENSPANP00000057903	20.9231	15.0769
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	67.3139	47.8964	papio_anubis	ENSPANP00000057394	17.8388	12.693
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	66.6667	48.8673	papio_anubis	ENSPANP00000055927	13.2561	9.71686
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	68.2848	48.2201	papio_anubis	ENSPANP00000055433	21.7302	15.345
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	66.6667	47.2492	papio_anubis	ENSPANP00000059831	21.1934	15.0206
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	63.4304	45.9547	papio_anubis	ENSPANP00000057103	17.5785	12.7354
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	67.3139	47.2492	papio_anubis	ENSPANP00000051549	22.3416	15.6821
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	66.9903	47.5728	papio_anubis	ENSPANP00000056897	23.0256	16.3515
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	71.521	53.3981	papio_anubis	ENSPANP00000056909	20.7317	15.4784
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	70.8738	51.1327	felis_catus	ENSFCAP00000061605	19.1937	13.8475
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	68.6084	50.4854	felis_catus	ENSFCAP00000054263	18.5477	13.6483
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	70.8738	51.7799	felis_catus	ENSFCAP00000058999	24.3604	17.7976
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	37.5405	28.8026	sus_scrofa	ENSSSCP00000080960	18.3544	14.0823
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	67.6375	50.4854	sus_scrofa	ENSSSCP00000035982	18.2692	13.6364
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	67.3139	50.1618	sus_scrofa	ENSSSCP00000073374	18.1818	13.549
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	66.9903	51.7799	mus_spicilegus	ENSMSIP00000003449	30.7578	23.7741
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	67.3139	52.4272	mus_spicilegus	ENSMSIP00000003990	32.3988	25.2336
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	40.7767	30.0971	heterocephalus_glaber_female	ENSHGLP00000055195	38.4146	28.3537
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	40.4531	26.5372	pelodiscus_sinensis	ENSPSIP00000000079	16.9607	11.1262
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	42.7184	27.5081	pelodiscus_sinensis	ENSPSIP00000000445	26.9939	17.3824
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	78.3172	65.6958	anolis_carolinensis	ENSACAP00000027446	25.2346	21.1679
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	66.9903	50.4854	vombatus_ursinus	ENSVURP00010000942	18.6486	14.0541
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	71.8447	54.6926	bos_indicus_hybrid	ENSBIXP00005001545	22.2668	16.9509
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	50.8091	35.2751	takifugu_rubripes	ENSTRUP00000078589	9.33413	6.48038
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	69.5793	51.1327	phocoena_sinus	ENSPSNP00000010893	20.4957	15.062
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	66.9903	47.8964	phocoena_sinus	ENSPSNP00000001177	17.0511	12.1911
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	39.8058	27.1845	taeniopygia_guttata	ENSTGUP00000022415	10.371	7.08263
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	55.6634	35.5987	ficedula_albicollis	ENSFALP00000032157	24.4318	15.625
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	56.9579	43.6893	podarcis_muralis	ENSPMRP00000031074	47.5676	36.4865
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	51.4563	35.9223	hucho_hucho	ENSHHUP00000066664	15.5577	10.8611
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	69.2557	53.7217	cervus_hanglu_yarkandensis	ENSCHYP00000026472	18.1356	14.0678
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	53.3981	36.8932	oryzias_javanicus	ENSOJAP00000014323	18.2119	12.5828
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	46.6019	33.657	mastacembelus_armatus	ENSMAMP00000037393	11.9205	8.60927
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	45.6311	28.8026	struthio_camelus_australis	ENSSCUP00000020911	11.8787	7.49789
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	60.5178	43.6893	leptobrachium_leishanense	ENSLLEP00000049259	15.7275	11.3541
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	60.8414	41.1003	leptobrachium_leishanense	ENSLLEP00000015785	17.8199	12.0379
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	60.8414	41.1003	leptobrachium_leishanense	ENSLLEP00000016142	18.5954	12.5618
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	60.8414	41.1003	leptobrachium_leishanense	ENSLLEP00000044717	15.8249	10.6902
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	60.8414	41.1003	leptobrachium_leishanense	ENSLLEP00000038642	19.0669	12.8803
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	60.8414	41.1003	leptobrachium_leishanense	ENSLLEP00000049187	21.1712	14.3018
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	60.8414	41.1003	leptobrachium_leishanense	ENSLLEP00000018413	15.8249	10.6902
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	60.8414	41.1003	leptobrachium_leishanense	ENSLLEP00000048424	21.0999	14.2536
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	53.0744	41.1003	cynoglossus_semilaevis	ENSCSEP00000029989	8.91789	6.90593
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	96.7638	89.644	gopherus_evgoodei	ENSGEVP00005008485	30.4481	28.2077
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	52.4272	39.1586	cyprinus_carpio_carpio	ENSCCRP00000048224	14.2606	10.6514
ENSTMTG00000013297	terrapene_carolina_triunguis	ENSTMTP00000018059	60.1942	41.4239	strigops_habroptila	ENSSHBP00005001208	27.9699	19.2481

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression