RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSTMTG00000013144	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	4063 bases	Strand	Plus strand
Position	PRFB02041002.1 : 2227 - 6289	RNA binding domain	RNase_H , RVT_1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSTMTP00000017848	RNase_H	PF00075	5.9e-20	1
ENSTMTP00000017848	RVT_1	PF00078	1.7e-25	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSTMTT00000018484	4063	1164aa	ENSTMTP00000017848

Gene Model

Click here to download ENSTMTG00000013144's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSTMTG00000013144's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000016519	63.0094	47.0219	terrapene_carolina_triunguis	ENSTMTP00000017848	17.268	12.8866
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000016122	63.5417	51.0417	terrapene_carolina_triunguis	ENSTMTP00000017848	15.7216	12.6289
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000025736	64.0777	51.7799	terrapene_carolina_triunguis	ENSTMTP00000017848	17.0103	13.7457
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000014612	57.1429	39.9417	terrapene_carolina_triunguis	ENSTMTP00000017848	16.8385	11.7698
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000016153	63.5417	51.0417	terrapene_carolina_triunguis	ENSTMTP00000017848	15.7216	12.6289
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000016926	63.0094	47.0219	terrapene_carolina_triunguis	ENSTMTP00000017848	17.268	12.8866
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000018059	64.0777	51.7799	terrapene_carolina_triunguis	ENSTMTP00000017848	17.0103	13.7457

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	19.5876	14.6907	eptatretus_burgeri	ENSEBUP00000005477	54.6763	41.0072
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	45.9622	32.0447	astyanax_mexicanus	ENSAMXP00000039342	45.1858	31.5034
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	26.2027	17.8694	esox_lucius	ENSELUP00000054143	45.4545	30.9985
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	30.1546	20.7045	esox_lucius	ENSELUP00000066957	35.3119	24.2455
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	38.8316	27.4914	oncorhynchus_kisutch	ENSOKIP00005073282	38.765	27.4443
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	41.5808	29.0378	oncorhynchus_kisutch	ENSOKIP00005002659	37.9013	26.4683
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	41.5808	28.866	oncorhynchus_kisutch	ENSOKIP00005082230	38.1102	26.4567
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	42.6117	29.2096	oncorhynchus_mykiss	ENSOMYP00000127409	38.6293	26.4798
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	29.8969	20.6186	salmo_salar	ENSSSAP00000180019	38.5382	26.5781
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	41.2371	27.4914	gadus_morhua	ENSGMOP00000023455	37.6766	25.1177
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	46.0481	30.4983	gadus_morhua	ENSGMOP00000025338	37.7731	25.0176
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	46.5636	30.6701	gadus_morhua	ENSGMOP00000028123	37.5346	24.723
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	34.7938	23.11	xiphophorus_maculatus	ENSXMAP00000041458	42.8571	28.4656
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	29.8969	20.2749	oreochromis_niloticus	ENSONIP00000077753	36.5163	24.7639
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	45.189	30.3265	oreochromis_niloticus	ENSONIP00000026887	37.9236	25.4506
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	44.5876	30.6701	oreochromis_niloticus	ENSONIP00000044713	39.5579	27.2104
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	36.6838	24.8282	oreochromis_niloticus	ENSONIP00000050297	43.3503	29.3401
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	31.0997	21.134	oreochromis_niloticus	ENSONIP00000035584	35.1456	23.8835
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	39.1753	26.89	oreochromis_niloticus	ENSONIP00000044539	39.8253	27.3362
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	43.4708	29.5533	oreochromis_niloticus	ENSONIP00000067714	36.4029	24.7482
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	31.8729	21.6495	oreochromis_niloticus	ENSONIP00000027841	41.9209	28.4746
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	45.0172	30.4124	oreochromis_niloticus	ENSONIP00000043786	37.7794	25.5227
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	38.488	25.4296	oreochromis_niloticus	ENSONIP00000079894	45.1613	29.8387
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	31.9588	21.3058	oreochromis_niloticus	ENSONIP00000031203	36.7589	24.5059
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	44.1581	29.6392	oreochromis_niloticus	ENSONIP00000080199	36.9253	24.7845
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	41.9244	28.0928	oreochromis_niloticus	ENSONIP00000081271	39.5783	26.5207
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	31.1856	21.2199	oreochromis_niloticus	ENSONIP00000066290	37.1166	25.2556
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	42.0962	28.2646	oreochromis_niloticus	ENSONIP00000038629	42.9448	28.8344
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	32.2165	21.7354	oreochromis_niloticus	ENSONIP00000066559	37.0553	25
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	31.701	21.5636	oreochromis_niloticus	ENSONIP00000058451	36.9369	25.1251
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	39.6048	25.8591	oreochromis_niloticus	ENSONIP00000048127	47.772	31.1917
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	31.0137	21.5636	oreochromis_niloticus	ENSONIP00000056320	37.7615	26.2552
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	44.7594	30.4983	oreochromis_niloticus	ENSONIP00000061925	37.5631	25.5948
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	41.8385	27.921	astatotilapia_calliptera	ENSACLP00000034005	39.4972	26.3585
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	44.4158	29.8969	astatotilapia_calliptera	ENSACLP00000009161	37.3016	25.1082
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	38.4021	22.8522	anas_platyrhynchos_platyrhynchos	ENSAPLP00000027283	37.7534	22.4662
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	37.1993	22.079	parus_major	ENSPMJP00000022706	36.5401	21.6878
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	54.9828	41.2371	callithrix_jacchus	ENSCJAP00000075811	55.3155	41.4866
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	49.6564	35.3093	callithrix_jacchus	ENSCJAP00000078223	51.7921	36.828
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	50.2577	35.4811	callithrix_jacchus	ENSCJAP00000078432	50.1285	35.3899
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	43.8144	30.6701	callithrix_jacchus	ENSCJAP00000083121	54.371	38.0597
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	29.4674	20.3608	callithrix_jacchus	ENSCJAP00000082968	49.7101	34.3478
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	50.0859	35.0515	callithrix_jacchus	ENSCJAP00000072396	52.287	36.5919
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	52.4914	36.8557	macaca_mulatta	ENSMMUP00000080343	54.946	38.5791
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	54.7251	38.6598	macaca_mulatta	ENSMMUP00000072364	54.6312	38.5935
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	52.5773	37.0275	macaca_mulatta	ENSMMUP00000071095	55.036	38.759
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	53.3505	37.2852	macaca_mulatta	ENSMMUP00000080589	55.5953	38.8541
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	53.4364	37.457	macaca_mulatta	ENSMMUP00000063903	55.6849	39.0331
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	49.9141	35.0515	macaca_mulatta	ENSMMUP00000072339	56.5175	39.6887
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	49.7423	35.0515	macaca_mulatta	ENSMMUP00000078227	57.9	40.8
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	45.7904	32.3883	macaca_mulatta	ENSMMUP00000065736	58.1243	41.1123
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	44.8454	31.9588	macaca_mulatta	ENSMMUP00000081125	58.9165	41.9865
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	52.4914	38.0584	macaca_mulatta	ENSMMUP00000069153	54.6512	39.6243
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	53.5223	37.6289	macaca_mulatta	ENSMMUP00000063581	55.7744	39.2122
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	45.7045	32.0447	macaca_mulatta	ENSMMUP00000069058	55.8237	39.1396
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	54.7251	38.6598	macaca_mulatta	ENSMMUP00000079793	54.3979	38.4287
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	46.7354	32.3883	papio_anubis	ENSPANP00000057903	55.7949	38.6667
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	54.7251	38.488	papio_anubis	ENSPANP00000057394	54.6312	38.422
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	54.2096	38.5739	papio_anubis	ENSPANP00000055927	40.6049	28.8932
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	46.9931	32.9038	papio_anubis	ENSPANP00000055433	56.3337	39.4439
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	48.7113	33.7629	papio_anubis	ENSPANP00000059831	58.3333	40.4321
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	52.1478	36.7698	papio_anubis	ENSPANP00000057103	54.4395	38.3857
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	46.2199	32.732	papio_anubis	ENSPANP00000051549	57.7873	40.9237
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	44.1581	31.0137	papio_anubis	ENSPANP00000056897	57.1746	40.1557
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	51.0309	37.1134	papio_anubis	ENSPANP00000056909	55.7223	40.5253
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	48.3677	35.567	felis_catus	ENSFCAP00000061605	49.3427	36.284
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	55.2406	39.8625	felis_catus	ENSFCAP00000054263	56.2555	40.5949
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	44.7594	33.2474	felis_catus	ENSFCAP00000058999	57.9533	43.0478
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	34.7079	25.1718	sus_scrofa	ENSSSCP00000080960	63.924	46.3608
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	54.811	38.9175	sus_scrofa	ENSSSCP00000035982	55.7692	39.5979
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	54.7251	38.8316	sus_scrofa	ENSSSCP00000073374	55.6818	39.5105
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	47.5086	33.3333	oryctolagus_cuniculus	ENSOCUP00000040024	55.8586	39.1919
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	34.1924	24.3127	mus_spicilegus	ENSMSIP00000003449	59.1382	42.0505
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	32.5601	23.7973	mus_spicilegus	ENSMSIP00000003990	59.0343	43.1464
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	15.5498	10.6529	heterocephalus_glaber_female	ENSHGLP00000055195	55.1829	37.8049
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	26.3746	17.354	pelodiscus_sinensis	ENSPSIP00000000079	41.6554	27.4084
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	13.8316	8.67698	pelodiscus_sinensis	ENSPSIP00000000445	32.9243	20.6544
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	38.9175	29.3814	anolis_carolinensis	ENSACAP00000027446	47.2367	35.6621
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	52.5773	38.6598	vombatus_ursinus	ENSVURP00010000942	55.1351	40.5405
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	47.1649	34.1065	bos_indicus_hybrid	ENSBIXP00005001545	55.0652	39.8195
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	43.4708	28.6942	takifugu_rubripes	ENSTRUP00000078589	30.0832	19.8573
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	50.7732	35.8247	phocoena_sinus	ENSPSNP00000010893	56.3394	39.7521
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	50.6873	34.9656	phocoena_sinus	ENSPSNP00000001177	48.5997	33.5255
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	37.1993	22.3368	taeniopygia_guttata	ENSTGUP00000022415	36.5093	21.9224
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	30.4124	20.5326	ficedula_albicollis	ENSFALP00000032157	50.2841	33.9489
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	17.1821	12.1993	podarcis_muralis	ENSPMRP00000031074	54.0541	38.3784
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	32.4742	21.5636	hucho_hucho	ENSHHUP00000066664	36.9863	24.5597
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	55.0687	39.0893	cervus_hanglu_yarkandensis	ENSCHYP00000026472	54.322	38.5593
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	34.3643	21.9072	oryzias_javanicus	ENSOJAP00000014323	44.1501	28.1457
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	38.6598	23.7113	struthio_camelus_australis	ENSSCUP00000020911	37.9107	23.2519
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	45.8763	31.7869	leptobrachium_leishanense	ENSLLEP00000049259	44.9117	31.1186
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	43.9003	30.2405	leptobrachium_leishanense	ENSLLEP00000015785	48.436	33.3649
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	43.299	29.7251	leptobrachium_leishanense	ENSLLEP00000016142	49.8516	34.2235
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	47.3368	32.2165	leptobrachium_leishanense	ENSLLEP00000044717	46.3805	31.5657
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	42.354	29.2096	leptobrachium_leishanense	ENSLLEP00000038642	50	34.4828
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	35.9107	24.5704	leptobrachium_leishanense	ENSLLEP00000049187	47.0721	32.2072
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	47.3368	32.2165	leptobrachium_leishanense	ENSLLEP00000018413	46.3805	31.5657
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	39.6907	27.4914	leptobrachium_leishanense	ENSLLEP00000048424	51.8519	35.9147
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	43.3849	31.1856	cynoglossus_semilaevis	ENSCSEP00000029989	27.4606	19.739
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	46.3058	30.6701	cyprinus_carpio_carpio	ENSCCRP00000048224	47.4472	31.4261
ENSTMTG00000013144	terrapene_carolina_triunguis	ENSTMTP00000017848	33.5052	22.6804	strigops_habroptila	ENSSHBP00005001208	58.6466	39.6992

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression