RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSTMTG00000012098	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	1968 bases	Strand	Plus strand
Position	PRFB02046454.1 : 2015 - 3982	RNA binding domain	RNase_H
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSTMTP00000016519	RNase_H	PF00075	2.4e-22	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSTMTT00000017109	960	319aa	ENSTMTP00000016519

Gene Model

Click here to download ENSTMTG00000012098's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSTMTG00000012098's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016926	100	100	terrapene_carolina_triunguis	ENSTMTP00000016519	100	100
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000014612	50.7289	46.9388	terrapene_carolina_triunguis	ENSTMTP00000016519	54.5455	50.4702
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016122	83.3333	74.6528	terrapene_carolina_triunguis	ENSTMTP00000016519	75.2351	67.3981
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000025736	85.1133	78.3172	terrapene_carolina_triunguis	ENSTMTP00000016519	82.4451	75.8621
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016153	83.3333	74.6528	terrapene_carolina_triunguis	ENSTMTP00000016519	75.2351	67.3981
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000018059	85.1133	78.3172	terrapene_carolina_triunguis	ENSTMTP00000016519	82.4451	75.8621
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000017848	17.268	12.8866	terrapene_carolina_triunguis	ENSTMTP00000016519	63.0094	47.0219

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	49.2163	32.6019	eptatretus_burgeri	ENSEBUP00000005477	37.6499	24.94
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	57.6803	40.1254	astyanax_mexicanus	ENSAMXP00000039342	15.5405	10.8108
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	42.9467	27.2727	esox_lucius	ENSELUP00000054143	20.4173	12.9657
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	42.9467	26.9592	esox_lucius	ENSELUP00000066957	13.7827	8.65191
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	43.5737	31.0345	oncorhynchus_kisutch	ENSOKIP00005073282	11.9211	8.49057
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	49.8433	34.7962	oncorhynchus_kisutch	ENSOKIP00005002659	12.4511	8.69225
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	49.8433	34.4828	oncorhynchus_kisutch	ENSOKIP00005082230	12.5197	8.66142
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	50.7837	34.1693	oncorhynchus_mykiss	ENSOMYP00000127409	12.6168	8.4891
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	43.5737	28.8401	salmo_salar	ENSSSAP00000180019	15.3931	10.1883
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	43.2602	29.4671	gadus_morhua	ENSGMOP00000023455	10.832	7.37834
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	50.4702	32.2884	gadus_morhua	ENSGMOP00000025338	11.346	7.25863
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	50.7837	32.2884	gadus_morhua	ENSGMOP00000028123	11.2188	7.13296
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	44.5141	28.8401	xiphophorus_maculatus	ENSXMAP00000041458	15.0265	9.73545
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	42.9467	27.5862	oreochromis_niloticus	ENSONIP00000077753	14.3757	9.234
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	49.8433	32.2884	oreochromis_niloticus	ENSONIP00000026887	11.4636	7.4261
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	49.8433	30.721	oreochromis_niloticus	ENSONIP00000044713	12.1189	7.46951
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	49.8433	31.0345	oreochromis_niloticus	ENSONIP00000050297	16.1421	10.0508
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	42.6332	28.5266	oreochromis_niloticus	ENSONIP00000035584	13.2039	8.83495
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	43.8871	28.8401	oreochromis_niloticus	ENSONIP00000044539	12.2271	8.03493
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	48.5893	31.0345	oreochromis_niloticus	ENSONIP00000067714	11.1511	7.1223
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	43.5737	28.8401	oreochromis_niloticus	ENSONIP00000027841	15.7062	10.3955
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	49.8433	31.6614	oreochromis_niloticus	ENSONIP00000043786	11.4636	7.2819
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	49.2163	31.348	oreochromis_niloticus	ENSONIP00000079894	15.8266	10.0806
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	44.8276	28.8401	oreochromis_niloticus	ENSONIP00000031203	14.1304	9.09091
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	49.5298	31.0345	oreochromis_niloticus	ENSONIP00000080199	11.3506	7.11207
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	50.1567	31.9749	oreochromis_niloticus	ENSONIP00000081271	12.9765	8.27251
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	44.2006	29.1536	oreochromis_niloticus	ENSONIP00000066290	14.4172	9.5092
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	49.8433	31.6614	oreochromis_niloticus	ENSONIP00000038629	13.9351	8.85188
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	44.5141	29.1536	oreochromis_niloticus	ENSONIP00000066559	14.0316	9.18972
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	43.8871	29.1536	oreochromis_niloticus	ENSONIP00000058451	14.014	9.30931
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	49.8433	31.6614	oreochromis_niloticus	ENSONIP00000048127	16.4767	10.4663
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	45.4545	28.5266	oreochromis_niloticus	ENSONIP00000056320	15.1674	9.51883
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	50.1567	31.6614	oreochromis_niloticus	ENSONIP00000061925	11.5357	7.2819
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	49.8433	31.6614	astatotilapia_calliptera	ENSACLP00000034005	12.8954	8.1914
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	49.5298	31.348	astatotilapia_calliptera	ENSACLP00000009161	11.3997	7.21501
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	94.9843	89.6552	chrysemys_picta_bellii	ENSCPBP00000013222	41.4501	39.1245
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	43.5737	26.0188	anas_platyrhynchos_platyrhynchos	ENSAPLP00000027283	11.7399	7.01014
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	42.3197	26.6458	parus_major	ENSPMJP00000022706	11.3924	7.173
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	72.7273	52.9781	callithrix_jacchus	ENSCJAP00000075811	20.0519	14.6067
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	61.442	43.8871	callithrix_jacchus	ENSCJAP00000078223	17.5627	12.5448
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	63.3229	43.5737	callithrix_jacchus	ENSCJAP00000078432	17.3093	11.9109
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	56.4263	38.8715	callithrix_jacchus	ENSCJAP00000083121	19.1898	13.2196
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	63.6364	43.8871	callithrix_jacchus	ENSCJAP00000082968	29.4203	20.2899
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	63.0094	42.6332	callithrix_jacchus	ENSCJAP00000072396	18.0269	12.1973
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	65.5172	44.8276	macaca_mulatta	ENSMMUP00000080343	18.795	12.8597
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	65.8307	45.1411	macaca_mulatta	ENSMMUP00000072364	18.0103	12.3499
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	65.5172	45.1411	macaca_mulatta	ENSMMUP00000071095	18.795	12.9496
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	65.5172	44.5141	macaca_mulatta	ENSMMUP00000080589	18.7108	12.7126
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	65.8307	44.2006	macaca_mulatta	ENSMMUP00000063903	18.8004	12.6231
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	64.8903	43.5737	macaca_mulatta	ENSMMUP00000072339	20.1362	13.5214
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	58.6207	39.185	macaca_mulatta	ENSMMUP00000078227	18.7	12.5
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	56.4263	38.2445	macaca_mulatta	ENSMMUP00000065736	19.6292	13.3043
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	56.7398	38.2445	macaca_mulatta	ENSMMUP00000081125	20.4289	13.7698
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	69.5925	48.5893	macaca_mulatta	ENSMMUP00000069153	19.8569	13.864
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	66.1442	44.2006	macaca_mulatta	ENSMMUP00000063581	18.8899	12.6231
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	57.6803	38.8715	macaca_mulatta	ENSMMUP00000069058	19.3074	13.0115
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	65.8307	45.1411	macaca_mulatta	ENSMMUP00000079793	17.9334	12.2972
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	56.7398	38.2445	papio_anubis	ENSPANP00000057903	18.5641	12.5128
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	65.5172	44.2006	papio_anubis	ENSPANP00000057394	17.9245	12.0926
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	64.8903	44.5141	papio_anubis	ENSPANP00000055927	13.3205	9.13771
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	66.1442	44.2006	papio_anubis	ENSPANP00000055433	21.7302	14.5211
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	57.6803	37.931	papio_anubis	ENSPANP00000059831	18.93	12.4486
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	62.6959	42.6332	papio_anubis	ENSPANP00000057103	17.9372	12.1973
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	57.6803	37.931	papio_anubis	ENSPANP00000051549	19.7637	12.9968
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	57.6803	37.931	papio_anubis	ENSPANP00000056897	20.4672	13.4594
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	64.5768	45.4545	papio_anubis	ENSPANP00000056909	19.3246	13.6023
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	69.279	47.0219	felis_catus	ENSFCAP00000061605	19.369	13.1464
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	65.8307	45.1411	felis_catus	ENSFCAP00000054263	18.3727	12.5984
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	61.442	41.6928	felis_catus	ENSFCAP00000058999	21.802	14.7942
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	31.0345	21.3166	sus_scrofa	ENSSSCP00000080960	15.6646	10.7595
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	66.7712	47.0219	sus_scrofa	ENSSSCP00000035982	18.6189	13.1119
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	66.7712	47.0219	sus_scrofa	ENSSSCP00000073374	18.6189	13.1119
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	57.6803	42.0063	mus_spicilegus	ENSMSIP00000003449	27.3403	19.9108
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	57.9937	42.3197	mus_spicilegus	ENSMSIP00000003990	28.8162	21.028
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	37.931	26.3323	heterocephalus_glaber_female	ENSHGLP00000055195	36.8902	25.6098
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	34.4828	21.3166	pelodiscus_sinensis	ENSPSIP00000000079	14.9254	9.22659
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	36.3636	22.5705	pelodiscus_sinensis	ENSPSIP00000000445	23.7219	14.7239
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	76.8025	62.069	anolis_carolinensis	ENSACAP00000027446	25.5474	20.6465
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	63.9498	46.395	vombatus_ursinus	ENSVURP00010000942	18.3784	13.3333
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	67.3981	49.2163	bos_indicus_hybrid	ENSBIXP00005001545	21.5647	15.7472
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	52.6646	35.4232	takifugu_rubripes	ENSTRUP00000078589	9.98811	6.71819
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	68.3386	47.9624	phocoena_sinus	ENSPSNP00000010893	20.7817	14.5853
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	66.1442	44.5141	phocoena_sinus	ENSPSNP00000001177	17.3806	11.6969
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	41.6928	26.0188	taeniopygia_guttata	ENSTGUP00000022415	11.2142	6.99831
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	59.5611	36.9906	ficedula_albicollis	ENSFALP00000032157	26.9886	16.7614
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	55.1724	39.8119	podarcis_muralis	ENSPMRP00000031074	47.5676	34.3243
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	44.2006	28.5266	hucho_hucho	ENSHHUP00000066664	13.7965	8.90411
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	65.8307	50.1567	cervus_hanglu_yarkandensis	ENSCHYP00000026472	17.7966	13.5593
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	49.8433	33.2288	oryzias_javanicus	ENSOJAP00000014323	17.5497	11.6998
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	41.6928	27.8997	mastacembelus_armatus	ENSMAMP00000037393	11.0099	7.36755
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	44.8276	26.9592	struthio_camelus_australis	ENSSCUP00000020911	12.0472	7.24516
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	58.9342	39.8119	leptobrachium_leishanense	ENSLLEP00000049259	15.8116	10.6812
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	52.9781	35.1097	leptobrachium_leishanense	ENSLLEP00000015785	16.019	10.6161
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	57.9937	38.558	leptobrachium_leishanense	ENSLLEP00000016142	18.2987	12.1662
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	58.6207	38.558	leptobrachium_leishanense	ENSLLEP00000044717	15.7407	10.3535
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	58.6207	38.558	leptobrachium_leishanense	ENSLLEP00000038642	18.9655	12.4746
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	52.9781	35.1097	leptobrachium_leishanense	ENSLLEP00000049187	19.0315	12.6126
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	58.6207	38.558	leptobrachium_leishanense	ENSLLEP00000018413	15.7407	10.3535
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	52.9781	35.1097	leptobrachium_leishanense	ENSLLEP00000048424	18.9675	12.5701
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	46.7085	35.1097	cynoglossus_semilaevis	ENSCSEP00000029989	8.10223	6.09027
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	83.6991	75.2351	gopherus_evgoodei	ENSGEVP00005008485	27.1894	24.4399
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	50.1567	34.7962	cyprinus_carpio_carpio	ENSCCRP00000048224	14.0845	9.77113
ENSTMTG00000012098	terrapene_carolina_triunguis	ENSTMTP00000016519	50.7837	33.5423	strigops_habroptila	ENSSHBP00005001208	24.3609	16.0902

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression