RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSTMTG00000011780	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	2521 bases	Strand	Plus strand
Position	PRFB02044684.1 : 3205 - 5725	RNA binding domain	RNase_H
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSTMTP00000016122	RNase_H	PF00075	1.1e-16	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSTMTT00000016690	864	288aa	ENSTMTP00000016122

Gene Model

Click here to download ENSTMTG00000011780's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSTMTG00000011780's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016153	100	100	terrapene_carolina_triunguis	ENSTMTP00000016122	100	100
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000025736	90.2913	88.6731	terrapene_carolina_triunguis	ENSTMTP00000016122	96.875	95.1389
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000018059	90.2913	88.6731	terrapene_carolina_triunguis	ENSTMTP00000016122	96.875	95.1389
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016519	75.2351	67.3981	terrapene_carolina_triunguis	ENSTMTP00000016122	83.3333	74.6528
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000014612	44.0233	39.0671	terrapene_carolina_triunguis	ENSTMTP00000016122	52.4306	46.5278
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016926	75.2351	67.3981	terrapene_carolina_triunguis	ENSTMTP00000016122	83.3333	74.6528
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000017848	15.7216	12.6289	terrapene_carolina_triunguis	ENSTMTP00000016122	63.5417	51.0417

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	55.2083	38.5417	eptatretus_burgeri	ENSEBUP00000005477	38.1295	26.6187
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	55.9028	39.5833	astyanax_mexicanus	ENSAMXP00000039342	13.598	9.62838
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	46.875	31.9444	esox_lucius	ENSELUP00000054143	20.1192	13.7109
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	47.2222	31.25	esox_lucius	ENSELUP00000066957	13.6821	9.05433
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	47.9167	34.7222	oncorhynchus_kisutch	ENSOKIP00005073282	11.8353	8.57633
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	48.2639	35.0694	oncorhynchus_kisutch	ENSOKIP00005002659	10.8849	7.90916
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	48.2639	35.0694	oncorhynchus_kisutch	ENSOKIP00005082230	10.9449	7.95276
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	47.2222	34.0278	oncorhynchus_mykiss	ENSOMYP00000127409	10.5919	7.6324
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	45.4861	31.5972	salmo_salar	ENSSSAP00000180019	14.5072	10.0775
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	47.2222	32.6389	gadus_morhua	ENSGMOP00000023455	10.675	7.37834
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	46.875	32.2917	gadus_morhua	ENSGMOP00000025338	9.51374	6.55391
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	47.2222	32.2917	gadus_morhua	ENSGMOP00000028123	9.41828	6.44044
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	47.5694	31.5972	xiphophorus_maculatus	ENSXMAP00000041458	14.4974	9.62963
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	47.5694	31.5972	oreochromis_niloticus	ENSONIP00000077753	14.3757	9.54879
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	47.9167	31.9444	oreochromis_niloticus	ENSONIP00000026887	9.94953	6.63302
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	49.3056	32.9861	oreochromis_niloticus	ENSONIP00000044713	10.8232	7.24085
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	48.2639	32.2917	oreochromis_niloticus	ENSONIP00000050297	14.1117	9.44162
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	47.2222	31.25	oreochromis_niloticus	ENSONIP00000035584	13.2039	8.73786
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	47.9167	31.5972	oreochromis_niloticus	ENSONIP00000044539	12.0524	7.9476
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	47.9167	31.9444	oreochromis_niloticus	ENSONIP00000067714	9.92806	6.61871
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	48.6111	32.6389	oreochromis_niloticus	ENSONIP00000027841	15.8192	10.6215
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	47.9167	31.5972	oreochromis_niloticus	ENSONIP00000043786	9.94953	6.56092
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	49.3056	31.25	oreochromis_niloticus	ENSONIP00000079894	14.3145	9.07258
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	49.3056	31.25	oreochromis_niloticus	ENSONIP00000031203	14.0316	8.89328
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	48.2639	31.5972	oreochromis_niloticus	ENSONIP00000080199	9.98563	6.53736
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	49.3056	33.3333	oreochromis_niloticus	ENSONIP00000081271	11.5166	7.78589
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	48.2639	31.9444	oreochromis_niloticus	ENSONIP00000066290	14.2127	9.40695
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	47.9167	31.5972	oreochromis_niloticus	ENSONIP00000038629	12.0947	7.97546
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	49.3056	31.25	oreochromis_niloticus	ENSONIP00000066559	14.0316	8.89328
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	47.9167	31.9444	oreochromis_niloticus	ENSONIP00000058451	13.8138	9.20921
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	47.9167	31.5972	oreochromis_niloticus	ENSONIP00000048127	14.3005	9.43005
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	50.6944	33.6806	oreochromis_niloticus	ENSONIP00000056320	15.272	10.1464
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	49.3056	32.9861	oreochromis_niloticus	ENSONIP00000061925	10.2379	6.84932
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	47.9167	31.9444	astatotilapia_calliptera	ENSACLP00000034005	11.1922	7.46148
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	47.5694	31.5972	astatotilapia_calliptera	ENSACLP00000009161	9.88456	6.56566
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	90.625	86.4583	chrysemys_picta_bellii	ENSCPBP00000005659	86.4238	82.4503
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	40.9722	25.6944	anas_platyrhynchos_platyrhynchos	ENSAPLP00000027283	9.96622	6.25
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	38.5417	26.3889	parus_major	ENSPMJP00000022706	9.36709	6.4135
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	73.6111	57.6389	callithrix_jacchus	ENSCJAP00000075811	18.3232	14.3475
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	59.0278	42.3611	callithrix_jacchus	ENSCJAP00000078223	15.233	10.9319
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	59.7222	43.0556	callithrix_jacchus	ENSCJAP00000078432	14.7386	10.6255
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	60.7639	44.0972	callithrix_jacchus	ENSCJAP00000083121	18.6567	13.5394
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	57.2917	40.9722	callithrix_jacchus	ENSCJAP00000082968	23.913	17.1014
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	59.375	42.7083	callithrix_jacchus	ENSCJAP00000072396	15.3363	11.0314
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	67.3611	48.6111	macaca_mulatta	ENSMMUP00000080343	17.446	12.5899
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	67.7083	48.9583	macaca_mulatta	ENSMMUP00000072364	16.7238	12.0926
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	67.3611	48.9583	macaca_mulatta	ENSMMUP00000071095	17.446	12.6799
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	67.7083	48.6111	macaca_mulatta	ENSMMUP00000080589	17.4575	12.5336
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	67.0139	48.2639	macaca_mulatta	ENSMMUP00000063903	17.2784	12.444
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	66.3194	48.2639	macaca_mulatta	ENSMMUP00000072339	18.5798	13.5214
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	68.0556	48.9583	macaca_mulatta	ENSMMUP00000078227	19.6	14.1
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	66.3194	47.2222	macaca_mulatta	ENSMMUP00000065736	20.8288	14.831
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	66.3194	47.9167	macaca_mulatta	ENSMMUP00000081125	21.5576	15.5756
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	70.1389	51.7361	macaca_mulatta	ENSMMUP00000069153	18.068	13.3274
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	67.7083	48.6111	macaca_mulatta	ENSMMUP00000063581	17.4575	12.5336
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	67.0139	48.2639	macaca_mulatta	ENSMMUP00000069058	20.2518	14.5855
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	67.7083	48.9583	macaca_mulatta	ENSMMUP00000079793	16.6524	12.041
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	66.3194	48.2639	papio_anubis	ENSPANP00000057903	19.5897	14.2564
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	67.7083	48.2639	papio_anubis	ENSPANP00000057394	16.7238	11.9211
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	67.0139	48.9583	papio_anubis	ENSPANP00000055927	12.4196	9.07336
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	68.75	48.6111	papio_anubis	ENSPANP00000055433	20.3913	14.4181
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	67.0139	47.5694	papio_anubis	ENSPANP00000059831	19.856	14.0947
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	64.5833	46.875	papio_anubis	ENSPANP00000057103	16.6816	12.1076
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	67.7083	47.5694	papio_anubis	ENSPANP00000051549	20.9452	14.7154
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	67.3611	48.2639	papio_anubis	ENSPANP00000056897	21.5795	15.4616
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	70.8333	52.4306	papio_anubis	ENSPANP00000056909	19.137	14.1651
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	70.8333	51.0417	felis_catus	ENSFCAP00000061605	17.8791	12.8834
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	66.6667	49.3056	felis_catus	ENSFCAP00000054263	16.7979	12.4234
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	70.4861	51.7361	felis_catus	ENSFCAP00000058999	22.5806	16.574
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	40.2778	30.9028	sus_scrofa	ENSSSCP00000080960	18.3544	14.0823
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	67.0139	50	sus_scrofa	ENSSSCP00000035982	16.8706	12.5874
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	66.6667	49.6528	sus_scrofa	ENSSSCP00000073374	16.7832	12.5
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	66.3194	50.6944	mus_spicilegus	ENSMSIP00000003449	28.3804	21.6939
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	66.6667	51.3889	mus_spicilegus	ENSMSIP00000003990	29.9065	23.053
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	37.8472	28.8194	heterocephalus_glaber_female	ENSHGLP00000055195	33.2317	25.3049
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	38.8889	25.6944	pelodiscus_sinensis	ENSPSIP00000000079	15.1967	10.0407
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	41.3194	26.3889	pelodiscus_sinensis	ENSPSIP00000000445	24.3354	15.5419
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	77.4306	63.8889	anolis_carolinensis	ENSACAP00000027446	23.2534	19.1867
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	66.3194	48.2639	vombatus_ursinus	ENSVURP00010000942	17.2072	12.5225
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	70.8333	52.7778	bos_indicus_hybrid	ENSBIXP00005001545	20.4614	15.2457
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	50.3472	33.6806	takifugu_rubripes	ENSTRUP00000078589	8.62069	5.76694
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	69.0972	51.3889	phocoena_sinus	ENSPSNP00000010893	18.9704	14.1087
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	66.6667	47.5694	phocoena_sinus	ENSPSNP00000001177	15.8155	11.285
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	37.8472	25.6944	taeniopygia_guttata	ENSTGUP00000022415	9.19056	6.23946
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	53.8194	33.3333	ficedula_albicollis	ENSFALP00000032157	22.017	13.6364
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	55.5556	41.3194	podarcis_muralis	ENSPMRP00000031074	43.2432	32.1622
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	50.6944	34.0278	hucho_hucho	ENSHHUP00000066664	14.2857	9.58904
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	68.75	52.7778	cervus_hanglu_yarkandensis	ENSCHYP00000026472	16.7797	12.8814
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	54.8611	37.5	oryzias_javanicus	ENSOJAP00000014323	17.4393	11.9205
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	46.1806	30.9028	mastacembelus_armatus	ENSMAMP00000037393	11.0099	7.36755
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	44.0972	27.4306	struthio_camelus_australis	ENSSCUP00000020911	10.6992	6.65543
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	57.9861	40.625	leptobrachium_leishanense	ENSLLEP00000049259	14.0454	9.8402
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	58.3333	38.5417	leptobrachium_leishanense	ENSLLEP00000015785	15.9242	10.5213
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	58.3333	38.5417	leptobrachium_leishanense	ENSLLEP00000016142	16.6172	10.9792
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	58.3333	38.5417	leptobrachium_leishanense	ENSLLEP00000044717	14.1414	9.34343
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	58.3333	38.5417	leptobrachium_leishanense	ENSLLEP00000038642	17.0385	11.2576
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	58.3333	38.5417	leptobrachium_leishanense	ENSLLEP00000049187	18.9189	12.5
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	58.3333	38.5417	leptobrachium_leishanense	ENSLLEP00000018413	14.1414	9.34343
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	58.3333	38.5417	leptobrachium_leishanense	ENSLLEP00000048424	18.8552	12.4579
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	50.6944	37.8472	cynoglossus_semilaevis	ENSCSEP00000029989	7.9391	5.92713
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	94.4444	86.1111	gopherus_evgoodei	ENSGEVP00005008485	27.6986	25.2546
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	50.6944	36.8056	cyprinus_carpio_carpio	ENSCCRP00000048224	12.8521	9.33099
ENSTMTG00000011780	terrapene_carolina_triunguis	ENSTMTP00000016122	61.8056	42.3611	strigops_habroptila	ENSSHBP00005001208	26.7669	18.3459

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression