RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	ENSTMTG00000004426	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	711 bases	Strand	Plus strand
Position	PRFB02000059.1 : 41538447 - 41539157	RNA binding domain	HARE-HTH
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSTMTP00000006018	HARE-HTH	PF05066	3.1e-07	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSTMTT00000006214	198	65aa	ENSTMTP00000006018

Gene Model

Click here to download ENSTMTG00000004426's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSTMTG00000004426's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTMTG00000004426	terrapene_carolina_triunguis	ENSTMTP00000005991	100	100	terrapene_carolina_triunguis	ENSTMTP00000006018	100	100

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTMTG00000004426	terrapene_carolina_triunguis	ENSTMTP00000006018	73.8462	73.8462	meleagris_gallopavo	ENSMGAP00000028503	52.1739	52.1739

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression