Description

Ensembl ID ENSTMTG00000001405 Gene ID 112119633 Accession -
Symbol Alias - Full Name small nuclear ribonucleoprotein F-like
Status Confidence Length 264 bases Strand Minus strand
Position PRFB02000059.1 : 111622126 - 111622389 RNA binding domain LSM
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSTMTP00000001759 LSM PF01423 2.9e-21 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSTMTT00000001813 264 87aa ENSTMTP00000001759

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000002168355.128241.0256terrapene_carolina_triunguisENSTMTP0000000175949.425336.7816
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000003052594.252987.3563terrapene_carolina_triunguisENSTMTP0000000175994.252987.3563
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000123595.294194.1176terrapene_carolina_triunguisENSTMTP0000000175993.103491.954
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP000000126856359terrapene_carolina_triunguisENSTMTP0000000175972.413867.8161
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000715698.823598.8235terrapene_carolina_triunguisENSTMTP0000000175996.551796.5517
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000001970677.319676.2887terrapene_carolina_triunguisENSTMTP0000000175986.206985.0575
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000910488.095286.9048terrapene_carolina_triunguisENSTMTP0000000175985.057583.908
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000002792869.411863.5294terrapene_carolina_triunguisENSTMTP0000000175967.816162.069

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175975.862165.5172caenorhabditis_elegansZK652.1.177.647167.0588
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175993.103474.7126drosophila_melanogasterFBpp008711892.045573.8636
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175977.011575.8621callorhinchus_miliiENSCMIP0000003570797.101495.6522
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175996.551796.5517latimeria_chalumnaeENSLACP0000000274771.794971.7949
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701193.1034lepisosteus_oculatusENSLOCP0000001937998.837294.186
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175996.551793.1034clupea_harengusENSCHAP0000005497896.551793.1034
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701195.4023danio_rerioENSDARP0000013425796.590994.3182
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701195.4023carassius_auratusENSCARP0000012123360.283758.8652
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175996.551793.1034carassius_auratusENSCARP0000012947096.551793.1034
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175996.551793.1034astyanax_mexicanusENSAMXP0000000762598.823595.2941
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701195.4023ictalurus_punctatusENSIPUP0000002808398.837296.5116
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701195.4023electrophorus_electricusENSEEEP0000003531598.837296.5116
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175998.850695.4023esox_luciusENSELUP0000000169010096.5116
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175998.850691.954esox_luciusENSELUP0000003050498.850691.954
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701190.8046oncorhynchus_kisutchENSOKIP0000501163393.406686.8132
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175998.850694.2529oncorhynchus_kisutchENSOKIP0000510221910095.3488
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175996.551789.6552oncorhynchus_kisutchENSOKIP0000505215197.674490.6977
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701193.1034oncorhynchus_mykissENSOMYP0000003522795.505691.0112
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175998.850691.954oncorhynchus_mykissENSOMYP0000010962598.850691.954
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175998.850695.4023salmo_salarENSSSAP0000015838010096.5116
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701190.8046salmo_salarENSSSAP0000007993297.701190.8046
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175998.850691.954salmo_truttaENSSTUP0000007823998.850691.954
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175995.402391.954salmo_truttaENSSTUP0000006185295.402391.954
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701193.1034salmo_truttaENSSTUP0000006886795.505691.0112
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175995.402393.1034gadus_morhuaENSGMOP0000000827997.647195.2941
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175996.551794.2529fundulus_heteroclitusENSFHEP0000000246473.684271.9298
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175995.402393.1034poecilia_reticulataENSPREP0000003340395.402393.1034
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175995.402393.1034xiphophorus_maculatusENSXMAP0000001547097.647195.2941
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701194.2529cyclopterus_lumpusENSCLMP0000504008798.837295.3488
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175995.402393.1034oreochromis_niloticusENSONIP0000006804497.647195.2941
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175995.402393.1034astatotilapia_callipteraENSACLP0000002372197.647195.2941
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175991.95488.5057sparus_aurataENSSAUP0001004321184.210581.0526
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175971.264471.2644notamacropus_eugeniiENSMEUP0000000061872.941272.9412
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175972.413872.4138choloepus_hoffmanniENSCHOP0000000830698.437598.4375
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701197.7011ailuropoda_melanoleucaENSAMEP0000000227134.836134.8361
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175979.310374.7126felis_catusENSFCAP0000002204063.302859.633
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175981.609274.7126panthera_pardusENSPPRP0000001460172.44966.3265
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175982.758678.1609panthera_leoENSPLOP0000002552969.230865.3846
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175972.413872.4138tursiops_truncatusENSTTRP0000000574273.255873.2558
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175985.057582.7586bos_taurusENSBTAP0000006375891.35888.8889
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175994.252982.7586ovis_aries_rambouilletENSOARP0002002007366.12958.0645
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175995.402393.1034cricetulus_griseus_chok1gshdENSCGRP0000100661265.354363.7795
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175978.160973.5632rattus_norvegicusENSRNOP0000009741557.142953.7815
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701197.7011cavia_porcellusENSCPOP0000001252798.837298.8372
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175995.402393.1034dicentrarchus_labraxENSDLAP0000500523397.647195.2941
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701195.4023erpetoichthys_calabaricusENSECRP0000003259398.837296.5116
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701197.7011monodelphis_domesticaENSMODP0000001006198.837298.8372
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175996.551795.4023anolis_carolinensisENSACAP0000001379898.823597.6471
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175996.551794.2529cyprinodon_variegatusENSCVAP0000001312466.666765.0794
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175989.655286.2069bos_grunniensENSBGRP0000004117577.227774.2574
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175986.206983.908bos_indicus_hybridENSBIXP0000502333992.592690.1235
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701197.7011microcebus_murinusENSMICP0000002646498.837298.8372
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175995.402391.954oryzias_melastigmaENSOMEP0000000209397.647194.1176
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175996.551794.2529neolamprologus_brichardiENSNBRP0000001507885.714383.6735
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175996.551794.2529kryptolebias_marmoratusENSKMAP0000001825197.674495.3488
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175995.402391.954pygocentrus_nattereriENSPNAP0000001323497.647194.1176
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701197.7011bison_bison_bisonENSBBBP0000002752798.837298.8372
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175995.402393.1034poecilia_latipinnaENSPLAP0000000008497.647195.2941
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175987.356382.7586jaculus_jaculusENSJJAP0000000559090.476285.7143
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175995.402383.908ciona_savignyiENSCSAVP0000001276794.318282.9545
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701194.2529scophthalmus_maximusENSSMAP0000000904498.837295.3488
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701197.7011sciurus_vulgarisENSSVLP0000500621198.837298.8372
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701194.2529labrus_bergyltaENSLBEP0000001141898.837295.3488
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175995.402387.3563rhinolophus_ferrumequinumENSRFEP0001000318696.511688.3721
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175981.609275.8621cottoperca_gobioENSCGOP0000005172676.344170.9677
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175995.402393.1034cottoperca_gobioENSCGOP0000005174997.647195.2941
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175995.402393.1034amphilophus_citrinellusENSACIP0000001705597.647195.2941
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175988.505782.7586podarcis_muralisENSPMRP0000000082091.666785.7143
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175995.402393.1034anabas_testudineusENSATEP0000003289489.247387.0968
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175996.551793.1034gasterosteus_aculeatusENSGACP0000002649798.823595.2941
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175980.459875.8621panthera_tigris_altaicaENSPTIP0000000205283.333378.5714
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701197.7011bos_mutusENSBMUP0000002479598.837298.8372
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175998.850691.954hucho_huchoENSHHUP0000006187098.850691.954
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175998.850694.2529hucho_huchoENSHHUP0000002919210095.3488
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175998.850691.954hucho_huchoENSHHUP0000000378898.850691.954
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701190.8046oncorhynchus_tshawytschaENSOTSP0000510188593.406686.8132
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175996.551789.6552oncorhynchus_tshawytschaENSOTSP0000501403597.674490.6977
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175996.551794.2529acanthochromis_polyacanthusENSAPOP0000002228165.62564.0625
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175995.402393.1034amphiprion_ocellarisENSAOCP0000001088097.647195.2941
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701194.2529tetraodon_nigroviridisENSTNIP0000001564698.837295.3488
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175963.218457.4713salvator_merianaeENSSMRP0000000679267.901261.7284
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175987.356380.4598salvator_merianaeENSSMRP0000002574961.290356.4516
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175995.402391.954nothobranchius_furzeriENSNFUP0001502182197.647194.1176
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701195.4023sinocyclocheilus_grahamiENSSGRP0000010219998.837296.5116
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175996.551793.1034sinocyclocheilus_grahamiENSSGRP0000007638196.551793.1034
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175995.402393.1034maylandia_zebraENSMZEP0000502062797.647195.2941
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175996.551794.2529scleropages_formosusENSSFOP0001503372195.454593.1818
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175996.551794.2529stegastes_partitusENSSPAP0000000440595.454593.1818
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175996.551794.2529larimichthys_croceaENSLCRP0000503905550.299449.1018
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175995.402391.954sander_luciopercaENSSLUP0000001539897.647194.1176
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175996.551795.4023denticeps_clupeoidesENSDCDP0000003939897.674496.5116
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175995.402393.1034amphiprion_perculaENSAPEP0000003107897.647195.2941
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175958.620748.2759saccharomyces_cerevisiaeYPR182W59.302348.8372
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175995.402391.954mastacembelus_armatusENSMAMP0000002487697.647194.1176
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175972.413872.4138leptobrachium_leishanenseENSLLEP0000003212074.117674.1176
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701197.7011neovison_visonENSNVIP0000000978398.837298.8372
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175996.551793.1034cynoglossus_semilaevisENSCSEP0000000736586.597983.5052
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175993.103487.3563carlito_syrichtaENSTSYP0000002483268.067263.8655
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175996.551794.2529seriola_lalandi_dorsalisENSSLDP0000000655497.674495.3488
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175997.701194.2529cyprinus_carpio_carpioENSCCRP0000011497365.384663.0769
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175973.563267.8161nannospalax_galiliENSNGAP0000000445575.294169.4118
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175996.551794.2529myripristis_murdjanENSMMDP0000504049494.38292.1348
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175996.551794.2529paramormyrops_kingsleyaeENSPKIP0000003608392.307790.1099
ENSTMTG00000001405terrapene_carolina_triunguisENSTMTP0000000175995.402393.1034pundamilia_nyerereiENSPNYP0000002885897.647195.2941

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression