RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSTBEG00000016998	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	558 bases	Strand	Minus strand
Position	scaffold_94947 : 7554 - 8111	RNA binding domain	Ribosomal_L22
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSTBEP00000014759	Ribosomal_L22	PF00237	1.5e-42	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSTBET00000016979	558	185aa	ENSTBEP00000014759

Gene Model

Click here to download ENSTBEG00000016998's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSTBEG00000016998's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000013749	59.0909	56.8182	tupaia_belangeri	ENSTBEP00000014759	42.1622	40.5405

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	58.3784	56.2162	notamacropus_eugenii	ENSMEUP00000015268	91.5254	88.1356
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	92.973	90.8108	dasypus_novemcinctus	ENSDNOP00000029043	93.4783	91.3043
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	95.1351	94.0541	callithrix_jacchus	ENSCJAP00000045482	95.6522	94.5652
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	79.4595	77.8378	cercocebus_atys	ENSCATP00000031980	93.6306	91.7197
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	91.8919	90.2703	macaca_fascicularis	ENSMFAP00000033214	92.8962	91.2568
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	86.4865	84.3243	macaca_nemestrina	ENSMNEP00000035076	91.954	89.6552
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	89.7297	87.5676	macaca_nemestrina	ENSMNEP00000009763	95.9538	93.6416
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	90.8108	89.7297	mandrillus_leucophaeus	ENSMLEP00000027280	94.382	93.2584
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.5946	93.5135	gorilla_gorilla	ENSGGOP00000022937	95.1087	94.0217
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	77.2973	73.5135	pan_troglodytes	ENSPTRP00000078356	86.1446	81.9277
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	85.4054	83.2432	canis_lupus_familiaris	ENSCAFP00845040679	79.798	77.7778
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	84.3243	81.6216	vulpes_vulpes	ENSVVUP00000014685	90.1734	87.2832
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	95.1351	94.0541	ailuropoda_melanoleuca	ENSAMEP00000019957	95.6522	94.5652
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	95.1351	94.0541	panthera_leo	ENSPLOP00000019628	95.6522	94.5652
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	95.1351	94.0541	panthera_pardus	ENSPPRP00000012704	95.6522	94.5652
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	83.7838	81.0811	balaenoptera_musculus	ENSBMSP00010004178	92.8144	89.8204
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	95.1351	94.0541	loxodonta_africana	ENSLAFP00000004672	95.6522	94.5652
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	89.7297	88.6487	capra_hircus	ENSCHIP00000009535	90.2174	89.1304
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	88.6487	85.9459	ovis_aries_rambouillet	ENSOARP00020022398	88.6487	85.9459
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.0541	91.8919	dipodomys_ordii	ENSDORP00000022505	95.082	92.8962
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	92.4324	91.3513	cricetulus_griseus_chok1gshd	ENSCGRP00001005612	92.9348	91.8478
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	85.9459	83.7838	cricetulus_griseus_chok1gshd	ENSCGRP00001015847	90.3409	88.0682
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	70.8108	65.9459	otolemur_garnettii	ENSOGAP00000021101	81.3665	75.7764
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	89.7297	87.027	microcebus_murinus	ENSMICP00000033114	92.7374	89.9441
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	92.973	90.8108	aotus_nancymaae	ENSANAP00000003001	93.4783	91.3043
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	41.0811	40	sorex_araneus	ENSSARP00000001020	64.4068	62.7119
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	62.1622	61.0811	carlito_syrichta	ENSTSYP00000015645	93.4959	91.8699
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	62.1622	61.0811	carlito_syrichta	ENSTSYP00000031189	93.4959	91.8699
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	93.5135	91.3513	canis_lupus_dingo	ENSCAFP00020026420	94.0217	91.8478
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	95.1351	94.0541	panthera_tigris_altaica	ENSPTIP00000005486	95.6522	94.5652
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	95.1351	94.0541	catagonus_wagneri	ENSCWAP00000024610	95.6522	94.5652
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	87.027	84.8649	propithecus_coquereli	ENSPCOP00000022827	92.5287	90.2299
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	82.7027	79.4595	propithecus_coquereli	ENSPCOP00000007782	88.4393	84.9711
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	80.5405	76.2162	phascolarctos_cinereus	ENSPCIP00000031155	90.303	85.4545
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	91.3513	89.1892	cebus_imitator	ENSCCAP00000028978	80.0948	78.1991
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	89.1892	88.1081	rhinolophus_ferrumequinum	ENSRFEP00010002168	89.6739	88.587
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	80	77.2973	nannospalax_galili	ENSNGAP00000012853	88.6228	85.6287
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	92.973	90.8108	cervus_hanglu_yarkandensis	ENSCHYP00000040616	93.4783	91.3043
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	76.7568	63.2432	caenorhabditis_elegans	Y48G8AL.8.1	75.9358	62.5668
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	80.5405	65.4054	drosophila_melanogaster	FBpp0070942	80.1075	65.0538
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	86.4865	75.1351	ciona_intestinalis	ENSCINP00000022040	87.4317	75.9563
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	49.1892	48.1081	petromyzon_marinus	ENSPMAP00000006771	86.6667	84.7619
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	90.2703	83.2432	eptatretus_burgeri	ENSEBUP00000015038	90.7609	83.6957
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	95.1351	91.3513	latimeria_chalumnae	ENSLACP00000010023	95.6522	91.8478
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.0541	90.2703	lepisosteus_oculatus	ENSLOCP00000014942	93.0481	89.3048
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	92.973	90.2703	clupea_harengus	ENSCHAP00000021418	93.4783	90.7609
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	92.973	89.7297	danio_rerio	ENSDARP00000119756	93.4783	90.2174
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	93.5135	90.2703	carassius_auratus	ENSCARP00000055118	80.4651	77.6744
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	93.5135	90.2703	carassius_auratus	ENSCARP00000018008	66.2835	63.9847
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	92.973	90.8108	astyanax_mexicanus	ENSAMXP00000029166	76.7857	75
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	92.973	89.1892	ictalurus_punctatus	ENSIPUP00000005221	93.4783	89.6739
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	87.5676	83.2432	esox_lucius	ENSELUP00000025726	87.0968	82.7957
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	92.973	89.7297	oncorhynchus_kisutch	ENSOKIP00005045335	67.1875	64.8438
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.0541	90.8108	oncorhynchus_kisutch	ENSOKIP00005044931	82.4645	79.6208
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	92.4324	89.1892	oncorhynchus_mykiss	ENSOMYP00000089736	92.9348	89.6739
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.0541	90.8108	oncorhynchus_mykiss	ENSOMYP00000062114	82.4645	79.6208
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	93.5135	90.2703	salmo_trutta	ENSSTUP00000052333	94.0217	90.7609
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	92.4324	89.1892	salmo_trutta	ENSSTUP00000082077	92.9348	89.6739
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.0541	89.7297	gadus_morhua	ENSGMOP00000038485	78.733	75.1131
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.5946	90.2703	fundulus_heteroclitus	ENSFHEP00000001400	74.4681	71.0638
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	87.027	82.7027	poecilia_reticulata	ENSPREP00000018337	87.9781	83.6066
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.5946	90.2703	xiphophorus_maculatus	ENSXMAP00000023050	79.5455	75.9091
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	83.7838	78.3784	cyclopterus_lumpus	ENSCLMP00005021885	70.1357	65.6109
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.5946	89.7297	oryzias_latipes	ENSORLP00000042190	65.0558	61.71
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	87.5676	83.7838	oreochromis_niloticus	ENSONIP00000047928	62.069	59.387
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	86.4865	82.7027	haplochromis_burtoni	ENSHBUP00000022030	65.0406	62.1951
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	86.4865	82.7027	astatotilapia_calliptera	ENSACLP00000014023	65.0406	62.1951
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.0541	90.8108	lates_calcarifer	ENSLCAP00010038470	94.5652	91.3043
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.0541	90.2703	xenopus_tropicalis	ENSXETP00000043811	94.5652	90.7609
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	87.027	84.3243	sphenodon_punctatus	ENSSPUP00000022472	95.8333	92.8571
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.0541	90.2703	dicentrarchus_labrax	ENSDLAP00005057107	94.5652	90.7609
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.0541	89.7297	erpetoichthys_calabaricus	ENSECRP00000012311	94.5652	90.2174
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.0541	89.7297	cyprinodon_variegatus	ENSCVAP00000017346	94.5652	90.2174
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.0541	89.1892	oryzias_melastigma	ENSOMEP00000024442	94.5652	89.6739
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.0541	90.2703	takifugu_rubripes	ENSTRUP00000055882	94.5652	90.7609
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	87.5676	83.2432	neolamprologus_brichardi	ENSNBRP00000007745	86.631	82.3529
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.0541	89.7297	kryptolebias_marmoratus	ENSKMAP00000021880	94.5652	90.2174
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.5946	91.3513	scophthalmus_maximus	ENSSMAP00000064655	14.881	14.3707
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	88.6487	83.7838	gasterosteus_aculeatus	ENSGACP00000017752	87.234	82.4468
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	87.5676	83.2432	pundamilia_nyererei	ENSPNYP00000014140	86.631	82.3529
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	95.1351	92.973	aquila_chrysaetos_chrysaetos	ENSACCP00020024117	95.6522	93.4783
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	81.0811	76.2162	labrus_bergylta	ENSLBEP00000025264	65.7895	61.8421
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.0541	89.7297	hippocampus_comes	ENSHCOP00000010475	94.5652	90.2174
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.5946	90.2703	poecilia_formosa	ENSPFOP00000002846	95.1087	90.7609
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.0541	90.2703	seriola_dumerili	ENSSDUP00000021663	94.5652	90.7609
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.0541	90.8108	scleropages_formosus	ENSSFOP00015030085	94.5652	91.3043
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.0541	90.2703	mastacembelus_armatus	ENSMAMP00000018522	94.5652	90.7609
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	74.5946	70.2703	sander_lucioperca	ENSSLUP00000056288	74.5946	70.2703
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	71.8919	65.9459	seriola_lalandi_dorsalis	ENSSLDP00000018799	87.5	80.2632
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	56.2162	51.8919	oryzias_sinensis	ENSOSIP00000007303	58.427	53.9326
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	85.9459	74.0541	ciona_savignyi	ENSCSAVP00000017488	84.5745	72.8723
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	93.5135	89.7297	paramormyrops_kingsleyae	ENSPKIP00000004870	94.0217	90.2174
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.0541	90.2703	myripristis_murdjan	ENSMMDP00005050722	94.5652	90.7609
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	93.5135	89.7297	cottoperca_gobio	ENSCGOP00000034147	87.8173	84.264
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.5946	90.2703	nothobranchius_furzeri	ENSNFUP00015007637	87.0647	83.0846
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	87.5676	83.2432	maylandia_zebra	ENSMZEP00005031231	86.631	82.3529
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.0541	90.2703	acanthochromis_polyacanthus	ENSAPOP00000031603	94.5652	90.7609
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	93.5135	90.8108	cyprinus_carpio_carpio	ENSCCRP00000048018	89.1753	86.5979
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	89.7297	87.5676	cyprinus_carpio_carpio	ENSCCRP00000017743	93.2584	91.0112
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.0541	90.2703	tetraodon_nigroviridis	ENSTNIP00000011866	94.5652	90.7609
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	65.9459	49.1892	saccharomyces_cerevisiae	YKL180W	66.3043	49.4565
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	65.4054	49.1892	saccharomyces_cerevisiae	YJL177W	65.7609	49.4565
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	80.5405	76.2162	larimichthys_crocea	ENSLCRP00005020732	78.4211	74.2105
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.0541	89.7297	anabas_testudineus	ENSATEP00000034019	94.5652	90.2174
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	87.5676	82.7027	betta_splendens	ENSBSLP00000021380	87.5676	82.7027
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	95.1351	92.973	salvator_merianae	ENSSMRP00000021296	95.6522	93.4783
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.0541	89.1892	oryzias_javanicus	ENSOJAP00000030762	81.3084	77.1028
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	89.7297	83.2432	amphiprion_ocellaris	ENSAOCP00000010512	75.1131	69.6833
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.5946	90.8108	denticeps_clupeoides	ENSDCDP00000002919	85.7843	82.3529
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.5946	90.8108	denticeps_clupeoides	ENSDCDP00000014824	85.7843	82.3529
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	59.4595	52.973	cynoglossus_semilaevis	ENSCSEP00000007657	72.8477	64.9007
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	88.1081	83.2432	cynoglossus_semilaevis	ENSCSEP00000032003	75.814	71.6279
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.5946	90.8108	amphiprion_percula	ENSAPEP00000033796	73.8397	70.8861
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	77.8378	71.3513	pygocentrus_nattereri	ENSPNAP00000024605	62.8821	57.6419
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	92.4324	89.1892	hucho_hucho	ENSHHUP00000062459	92.9348	89.6739
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.0541	90.8108	hucho_hucho	ENSHHUP00000066506	82.4645	79.6208
ENSTBEG00000016998	tupaia_belangeri	ENSTBEP00000014759	94.5946	90.2703	poecilia_latipinna	ENSPLAP00000031609	95.1087	90.7609

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression