RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSTBEG00000009141	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	61248 bases	Strand	Minus strand
Position	GeneScaffold_4098 : 11 - 61258	RNA binding domain	DUF2075
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSTBEP00000007913	DUF2075	PF09848	2e-05	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSTBET00000009131	2091	697aa	ENSTBEP00000007913

Gene Model

Click here to download ENSTBEG00000009141's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSTBEG00000009141's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000008106	34.471	25.4835	tupaia_belangeri	ENSTBEP00000007913	43.472	32.1377
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000001619	32.489	23.5683	tupaia_belangeri	ENSTBEP00000007913	42.3242	30.703
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000008299	24.8634	12.0219	tupaia_belangeri	ENSTBEP00000007913	13.056	6.31277

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	50.0717	38.0201	sarcophilus_harrisii	ENSSHAP00000025158	38.6918	29.3792
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	37.0158	27.2597	notamacropus_eugenii	ENSMEUP00000012402	28.8914	21.2766
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	25.3945	19.5122	choloepus_hoffmanni	ENSCHOP00000001776	37.5796	28.8747
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	29.9857	23.5294	erinaceus_europaeus	ENSEEUP00000003576	39.0654	30.6542
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	55.2367	41.7504	echinops_telfairi	ENSETEP00000002186	42.9688	32.4777
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	58.1062	47.6327	callithrix_jacchus	ENSCJAP00000027309	45.2514	37.095
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	59.2539	48.4935	cercocebus_atys	ENSCATP00000003294	46.0424	37.6812
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	59.5409	48.637	macaca_fascicularis	ENSMFAP00000002380	46.2653	37.7926
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	59.8278	48.7805	macaca_mulatta	ENSMMUP00000075061	46.4883	37.9041
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	59.8278	48.4935	macaca_nemestrina	ENSMNEP00000019677	46.4883	37.6812
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	56.9584	47.2023	papio_anubis	ENSPANP00000020045	45.4754	37.6861
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	60.1148	49.9283	mandrillus_leucophaeus	ENSMLEP00000033156	46.7113	38.796
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	0.286944	0.143472	mandrillus_leucophaeus	ENSMLEP00000020351	1.9802	0.990099
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	60.1148	50.2152	gorilla_gorilla	ENSGGOP00000013938	46.7113	39.019
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	59.9713	49.6413	pan_paniscus	ENSPPAP00000032337	46.5998	38.573
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	60.2583	50.0717	pan_troglodytes	ENSPTRP00000015384	46.7706	38.8641
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	59.5409	49.3544	pongo_abelii	ENSPPYP00000009201	46.2653	38.3501
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	60.4017	50.2152	homo_sapiens	ENSP00000285013	46.9342	39.019
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	57.1019	47.0588	tursiops_truncatus	ENSTTRP00000004626	44.3701	36.5663
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	56.3845	47.3458	delphinapterus_leucas	ENSDLEP00000025223	45.0172	37.8007
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	56.6714	47.2023	physeter_catodon	ENSPCTP00005019369	43.9377	36.5962
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	57.1019	48.3501	balaenoptera_musculus	ENSBMSP00010019448	44.3701	37.5697
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	56.241	47.4892	loxodonta_africana	ENSLAFP00000013628	43.5556	36.7778
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	61.2626	51.6499	equus_asinus	ENSEASP00005046284	47.9237	40.404
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	58.5366	49.0674	equus_asinus	ENSEASP00005062916	46.0497	38.6005
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	61.2626	51.7934	equus_caballus	ENSECAP00000039812	47.87	40.4709
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	58.967	49.3544	equus_caballus	ENSECAP00000013228	45.7175	38.2647
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	57.5323	47.7762	procavia_capensis	ENSPCAP00000009988	52.1456	43.303
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	57.1019	47.3458	sus_scrofa	ENSSSCP00000072717	44.3207	36.7483
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	56.9584	45.4806	bos_taurus	ENSBTAP00000025891	43.7225	34.9119
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	58.1062	46.9154	camelus_dromedarius	ENSCDRP00005017950	45.0501	36.3737
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	56.528	45.4806	capra_hircus	ENSCHIP00000032926	43.3443	34.8735
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	45.911	38.1636	ochotona_princeps	ENSOPRP00000010812	37.3832	31.0748
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	57.3888	46.7719	oryctolagus_cuniculus	ENSOCUP00000003040	44.2478	36.0619
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	59.1105	46.6284	marmota_marmota_marmota	ENSMMMP00000021291	45.126	35.5969
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	59.8278	48.3501	dipodomys_ordii	ENSDORP00000023430	46.1283	37.2788
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	57.3888	46.3415	cricetulus_griseus_chok1gshd	ENSCGRP00001023867	44.6927	36.0894
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	56.528	46.9154	mus_caroli	MGP_CAROLIEiJ_P0028792	43.6323	36.2126
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	56.528	46.9154	mus_caroli	MGP_CAROLIEiJ_P0028790	43.6323	36.2126
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	56.6714	46.7719	mesocricetus_auratus	ENSMAUP00000013369	44.0848	36.3839
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	57.5323	47.0588	mus_musculus	ENSMUSP00000040060	44.0659	36.044
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	57.5323	47.4892	mus_musculus	ENSMUSP00000044435	44.0659	36.3736
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	28.1205	21.8077	mus_spretus	MGP_SPRETEiJ_P0030201	45.1613	35.023
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	27.2597	21.6643	mus_spretus	MGP_SPRETEiJ_P0030200	46.0048	36.5617
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	14.3472	11.9082	mus_spicilegus	ENSMSIP00000000576	39.0625	32.4219
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	27.8336	22.6686	mus_spicilegus	ENSMSIP00000010048	50.7853	41.3613
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	13.9168	11.1908	mus_spicilegus	ENSMSIP00000007551	37.8906	30.4688
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	14.3472	11.6212	mus_spicilegus	ENSMSIP00000003737	39.0625	31.6406
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	12.769	9.7561	monodelphis_domestica	ENSMODP00000049929	38.0342	29.0598
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	56.241	45.3372	rattus_norvegicus	ENSRNOP00000068469	42.7481	34.4602
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	51.076	39.8852	vombatus_ursinus	ENSVURP00010016181	39.4678	30.8204
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	51.076	39.8852	vombatus_ursinus	ENSVURP00010020516	39.4678	30.8204
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	57.1019	45.7676	bos_indicus_hybrid	ENSBIXP00005017544	43.4024	34.7873
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	54.9498	44.7633	vicugna_pacos	ENSVPAP00000001893	49.6757	40.4669
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	56.9584	45.7676	bos_grunniens	ENSBGRP00000036306	44.3575	35.6425
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	59.1105	48.7805	otolemur_garnettii	ENSOGAP00000001251	45.6257	37.6523
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	56.9584	45.911	otolemur_garnettii	ENSOGAP00000014757	43.9159	35.3982
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	57.1019	47.3458	microcebus_murinus	ENSMICP00000049394	43.2609	35.8696
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	57.6758	46.9154	aotus_nancymaae	ENSANAP00000002563	44.9162	36.5363
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	57.1019	47.9197	monodon_monoceros	ENSMMNP00015022140	46.9894	39.4333
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	28.1205	21.6643	chinchilla_lanigera	ENSCLAP00000011849	49.4949	38.1313
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	57.8192	48.2066	saimiri_boliviensis_boliviensis	ENSSBOP00000014162	45.0279	37.5419
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	59.1105	48.924	rhinopithecus_roxellana	ENSRROP00000004431	45.9309	38.0156
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	57.5323	47.9197	microtus_ochrogaster	ENSMOCP00000021062	44.4568	37.0288
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	54.9498	45.3372	sorex_araneus	ENSSARP00000001168	43.3749	35.7871
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	55.0933	45.7676	nomascus_leucogenys	ENSNLEP00000043735	44.1887	36.7089
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	56.9584	46.6284	moschus_moschiferus	ENSMMSP00000016667	43.7225	35.7929
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	57.1019	45.911	bison_bison_bison	ENSBBBP00000006761	44.3207	35.6347
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	58.8235	49.3544	carlito_syrichta	ENSTSYP00000023951	45.9641	38.565
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	58.8235	47.7762	peromyscus_maniculatus_bairdii	ENSPEMP00000008328	45.4545	36.918
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	56.3845	46.4849	pteropus_vampyrus	ENSPVAP00000003716	44.1077	36.3636
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	58.967	47.6327	jaculus_jaculus	ENSJJAP00000018982	45.6667	36.8889
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	56.8149	47.2023	catagonus_wagneri	ENSCWAP00000008910	44.2458	36.7598
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	56.9584	46.198	propithecus_coquereli	ENSPCOP00000007624	44.5067	36.0987
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	58.967	48.637	prolemur_simus	ENSPSMP00000025473	46.336	38.2187
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	57.1019	45.911	bos_mutus	ENSBMUP00000017026	44.3701	35.6745
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	55.3802	45.6241	rhinopithecus_bieti	ENSRBIP00000039913	44.6243	36.763
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	51.363	40.1722	phascolarctos_cinereus	ENSPCIP00000004464	39.6896	31.0421
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	55.6671	44.4763	myotis_lucifugus	ENSMLUP00000015999	42.6843	34.1034
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	57.9627	48.3501	cebus_imitator	ENSCCAP00000002243	45.1397	37.6536
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	58.2496	46.4849	sciurus_vulgaris	ENSSVLP00005014119	45.5668	36.3636
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	56.6714	46.0545	rhinolophus_ferrumequinum	ENSRFEP00010031460	44.5321	36.1894
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	59.5409	49.7848	chlorocebus_sabaeus	ENSCSAP00000002579	46.2653	38.6845
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	57.6758	47.0588	nannospalax_galili	ENSNGAP00000021122	44.8161	36.5663
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	56.9584	45.7676	cervus_hanglu_yarkandensis	ENSCHYP00000027101	44.2586	35.563
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	42.0373	25.9684	callorhinchus_milii	ENSCMIP00000044549	32.8107	20.2688
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	46.0545	29.5552	latimeria_chalumnae	ENSLACP00000021131	35.786	22.9654
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	44.0459	27.8336	lepisosteus_oculatus	ENSLOCP00000006652	34.1111	21.5556
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	39.5983	25.9684	astyanax_mexicanus	ENSAMXP00000022260	31.0112	20.3371
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	37.7331	24.5337	astyanax_mexicanus	ENSAMXP00000030135	29.8524	19.4098
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	16.7862	10.9039	electrophorus_electricus	ENSEEEP00000021687	31.7073	20.5962
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	41.4634	26.8293	electrophorus_electricus	ENSEEEP00000034382	32.8409	21.25
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	9.61263	5.30847	electrophorus_electricus	ENSEEEP00000034375	25.188	13.9098
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	46.7719	34.5768	chrysemys_picta_bellii	ENSCPBP00000040495	35.9031	26.5419
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	0.860832	0.573888	chrysemys_picta_bellii	ENSCPBP00000001678	5	3.33333
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	4.73458	2.86944	crocodylus_porosus	ENSCPRP00005007778	18.232	11.0497
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	46.0545	32.2812	anas_platyrhynchos_platyrhynchos	ENSAPLP00000025998	32.9231	23.0769
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	46.3415	32.2812	anas_platyrhynchos_platyrhynchos	ENSAPLP00000007331	35.3779	24.644
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	46.0545	33.7159	meleagris_gallopavo	ENSMGAP00000003935	34.9673	25.5991
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	48.7805	34.8637	pelodiscus_sinensis	ENSPSIP00000014013	35.9408	25.6871
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	45.1937	33.142	pelodiscus_sinensis	ENSPSIP00000014906	34.7299	25.4686
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	39.3113	24.2468	erpetoichthys_calabaricus	ENSECRP00000023968	30.3769	18.7361
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	12.769	8.60832	aquila_chrysaetos_chrysaetos	ENSACCP00020012228	31.338	21.1268
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	42.1808	26.6858	scleropages_formosus	ENSSFOP00015017097	32.4862	20.5525
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	40.3156	25.538	paramormyrops_kingsleyae	ENSPKIP00000024453	32.2989	20.4598
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	43.0416	27.4032	paramormyrops_kingsleyae	ENSPKIP00000000170	33.3704	21.2458
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	20.66	12.1951	paramormyrops_kingsleyae	ENSPKIP00000000345	34.8668	20.5811
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	37.5897	24.6772	paramormyrops_kingsleyae	ENSPKIP00000000215	30.5006	20.0233
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	17.5036	10.33	paramormyrops_kingsleyae	ENSPKIP00000000228	36.9697	21.8182
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	42.0373	28.8379	leptobrachium_leishanense	ENSLLEP00000021964	31.9869	21.9432
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	46.9154	34.5768	chelonoidis_abingdonii	ENSCABP00000003164	36.1326	26.6298
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	46.7719	35.0072	gopherus_evgoodei	ENSGEVP00005019792	35.9823	26.9316
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	46.6284	32.8551	struthio_camelus_australis	ENSSCUP00000018583	34.6482	24.4136
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	45.7676	32.4247	anser_brachyrhynchus	ENSABRP00000002469	34.5987	24.5119
ENSTBEG00000009141	tupaia_belangeri	ENSTBEP00000007913	39.1679	26.8293	pygocentrus_nattereri	ENSPNAP00000022336	30.1325	20.6402

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression