RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSSVLG00005017471	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	650 bases	Strand	Minus strand
Position	CACRXJ010000493.1 : 214376 - 215025	RNA binding domain	SAP18
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSVLP00005021885	SAP18	PF06487	5.7e-20	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSSVLT00005024372	303	100aa	ENSSVLP00005021885

Gene Model

Click here to download ENSSVLG00005017471's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSVLG00005017471's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005020149	50	48.2558	sciurus_vulgaris	ENSSVLP00005021885	86	83

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	62	58	oryctolagus_cuniculus	ENSOCUP00000029090	46.2687	43.2836
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	19	15	oryctolagus_cuniculus	ENSOCUP00000038234	18.0952	14.2857
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	63	53	oryctolagus_cuniculus	ENSOCUP00000010940	30	25.2381
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	69	66	mesocricetus_auratus	ENSMAUP00000004217	53.4884	51.1628
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	82	76	octodon_degus	ENSODEP00000005536	53.5948	49.6732
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	71	69	microcebus_murinus	ENSMICP00000051822	61.2069	59.4828
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	80	73	carlito_syrichta	ENSTSYP00000017760	51.9481	47.4026
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	62	53	neovison_vison	ENSNVIP00000022768	29.3839	25.1185
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	73	70	cebus_imitator	ENSCCAP00000023859	71.5686	68.6274
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	51	36	caenorhabditis_elegans	C16C10.4.1	30.7229	21.6867
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	50	41	drosophila_melanogaster	FBpp0312505	33.3333	27.3333
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	58	44	ciona_intestinalis	ENSCINP00000031871	35.8025	27.1605
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	46	39	petromyzon_marinus	ENSPMAP00000001164	33.8235	28.6765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	55	37	eptatretus_burgeri	ENSEBUP00000025827	28.6458	19.2708
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	71	65	callorhinchus_milii	ENSCMIP00000022068	39.011	35.7143
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	69	65	latimeria_chalumnae	ENSLACP00000011300	45.098	42.4837
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	64	lepisosteus_oculatus	ENSLOCP00000013407	44.4444	41.8301
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	69	65	clupea_harengus	ENSCHAP00000008421	45.098	42.4837
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	67	63	danio_rerio	ENSDARP00000075051	43.7908	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	64	carassius_auratus	ENSCARP00000042855	44.4444	41.8301
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	64	carassius_auratus	ENSCARP00000074554	44.4444	41.8301
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	64	astyanax_mexicanus	ENSAMXP00000030541	44.4444	41.8301
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	64	ictalurus_punctatus	ENSIPUP00000005351	42.236	39.7516
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	70	66	electrophorus_electricus	ENSEEEP00000049600	39.3258	37.0787
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	67	63	esox_lucius	ENSELUP00000029408	43.7908	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	65	58	esox_lucius	ENSELUP00000002282	41.6667	37.1795
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	16	13	oncorhynchus_kisutch	ENSOKIP00005003085	14.1593	11.5044
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	65	58	oncorhynchus_mykiss	ENSOMYP00000018613	41.6667	37.1795
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	65	58	oncorhynchus_mykiss	ENSOMYP00000004367	41.6667	37.1795
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	65	58	salmo_salar	ENSSSAP00000052204	41.6667	37.1795
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	65	58	salmo_salar	ENSSSAP00000113810	41.6667	37.1795
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	65	58	salmo_trutta	ENSSTUP00000001575	41.6667	37.1795
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	65	58	salmo_trutta	ENSSTUP00000067694	41.6667	37.1795
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	31	21	gadus_morhua	ENSGMOP00000062740	18.7879	12.7273
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	63	fundulus_heteroclitus	ENSFHEP00000013113	44.4444	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	63	poecilia_reticulata	ENSPREP00000009990	44.4444	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	63	xiphophorus_maculatus	ENSXMAP00000036786	44.4444	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	69	63	oryzias_latipes	ENSORLP00000033612	45.098	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	63	cyclopterus_lumpus	ENSCLMP00005005866	44.4444	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	69	63	oreochromis_niloticus	ENSONIP00000015028	45.098	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	66	60	haplochromis_burtoni	ENSHBUP00000034252	36.0656	32.7869
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	72	65	astatotilapia_calliptera	ENSACLP00000039905	39.5604	35.7143
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	63	sparus_aurata	ENSSAUP00010010260	44.7368	41.4474
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	69	63	lates_calcarifer	ENSLCAP00010003419	45.098	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	69	63	lates_calcarifer	ENSLCAP00010004746	45.098	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	66	xenopus_tropicalis	ENSXETP00000021163	44.4444	43.1373
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	32	23	crocodylus_porosus	ENSCPRP00005018666	18.2857	13.1429
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	58	53	meleagris_gallopavo	ENSMGAP00000021288	17.2619	15.7738
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	63	dicentrarchus_labrax	ENSDLAP00005048767	44.4444	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	69	64	erpetoichthys_calabaricus	ENSECRP00000005816	44.2308	41.0256
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	46	43	anolis_carolinensis	ENSACAP00000002640	35.1145	32.8244
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	63	cyprinodon_variegatus	ENSCVAP00000024196	44.4444	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	63	takifugu_rubripes	ENSTRUP00000020653	44.4444	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	69	63	oryzias_melastigma	ENSOMEP00000023255	44.5161	40.6452
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	59	49	neolamprologus_brichardi	ENSNBRP00000028167	39.3333	32.6667
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	63	kryptolebias_marmoratus	ENSKMAP00000000558	44.4444	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	70	64	seriola_dumerili	ENSSDUP00000013722	44.586	40.7643
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	71	65	pygocentrus_nattereri	ENSPNAP00000025541	37.5661	34.3915
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	63	poecilia_formosa	ENSPFOP00000003968	44.4444	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	63	poecilia_latipinna	ENSPLAP00000007222	44.4444	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	58	45	ciona_savignyi	ENSCSAVP00000005265	37.1795	28.8462
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	69	63	oryzias_javanicus	ENSOJAP00000000451	45.098	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	63	cottoperca_gobio	ENSCGOP00000000293	44.4444	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	63	scophthalmus_maximus	ENSSMAP00000004148	44.4444	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	69	63	amphiprion_ocellaris	ENSAOCP00000024441	45.098	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	56	48	pundamilia_nyererei	ENSPNYP00000022567	37.5839	32.2148
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	67	63	betta_splendens	ENSBSLP00000007337	43.7908	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	63	larimichthys_crocea	ENSLCRP00005007915	44.4444	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	69	63	amphilophus_citrinellus	ENSACIP00000024029	45.6954	41.7219
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	67	61	hippocampus_comes	ENSHCOP00000001392	43.7908	39.8693
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	59	52	mastacembelus_armatus	ENSMAMP00000051726	38.5621	33.9869
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	72	66	cynoglossus_semilaevis	ENSCSEP00000021635	41.8605	38.3721
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	63	tetraodon_nigroviridis	ENSTNIP00000013247	44.4444	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	63	gasterosteus_aculeatus	ENSGACP00000018596	44.4444	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	69	63	amphiprion_percula	ENSAPEP00000024675	45.098	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	69	63	myripristis_murdjan	ENSMMDP00005005156	45.098	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	69	66	leptobrachium_leishanense	ENSLLEP00000005416	45.098	43.1373
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	64	scleropages_formosus	ENSSFOP00015070528	44.4444	41.8301
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	69	63	acanthochromis_polyacanthus	ENSAPOP00000024551	45.6954	41.7219
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	69	63	stegastes_partitus	ENSSPAP00000002044	45.098	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	65	58	oncorhynchus_tshawytscha	ENSOTSP00005037818	41.6667	37.1795
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	65	58	oncorhynchus_tshawytscha	ENSOTSP00005034841	41.6667	37.1795
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	64	paramormyrops_kingsleyae	ENSPKIP00000014869	44.4444	41.8301
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	63	sander_lucioperca	ENSSLUP00000060758	44.4444	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	64	sinocyclocheilus_grahami	ENSSGRP00000071675	44.4444	41.8301
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	64	sinocyclocheilus_grahami	ENSSGRP00000101261	44.4444	41.8301
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	64	sinocyclocheilus_grahami	ENSSGRP00000071649	44.4444	41.8301
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	75	66	seriola_lalandi_dorsalis	ENSSLDP00000003284	42.1348	37.0787
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	70	66	anser_brachyrhynchus	ENSABRP00000020296	37.6344	35.4839
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	62	nothobranchius_furzeri	ENSNFUP00015003755	44.4444	40.5229
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	12	12	struthio_camelus_australis	ENSSCUP00000020743	13.0435	13.0435
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	69	65	denticeps_clupeoides	ENSDCDP00000037736	45.098	42.4837
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	69	63	oryzias_sinensis	ENSOSIP00000031273	45.098	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	67	63	cyprinus_carpio_carpio	ENSCCRP00000052551	43.7908	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	64	cyprinus_carpio_carpio	ENSCCRP00000048699	44.4444	41.8301
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	63	anabas_testudineus	ENSATEP00000008803	44.4444	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	68	62	labrus_bergylta	ENSLBEP00000020087	44.4444	40.5229
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	69	63	maylandia_zebra	ENSMZEP00005002022	45.098	41.1765
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	5	4	hucho_hucho	ENSHHUP00000027070	6.94444	5.55556
ENSSVLG00005017471	sciurus_vulgaris	ENSSVLP00005021885	65	57	hucho_hucho	ENSHHUP00000088697	41.6667	36.5385

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression