RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSSVLG00005016411	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	732 bases	Strand	Minus strand
Position	7 : 21726187 - 21726918	RNA binding domain	KH_2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSVLP00005020573	KH_2	PF07650	1.1e-11	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSSVLT00005022928	486	161aa	ENSSVLP00005020573

Gene Model

Click here to download ENSSVLG00005016411's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSVLG00005016411's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005028030	62.4031	62.4031	sciurus_vulgaris	ENSSVLP00005020573	100	100
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005026776	95.9459	95.2703	sciurus_vulgaris	ENSSVLP00005020573	88.1988	87.5776
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005008542	57.3171	56.0976	sciurus_vulgaris	ENSSVLP00005020573	29.1925	28.5714
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005009016	87.6712	84.2466	sciurus_vulgaris	ENSSVLP00005020573	79.5031	76.3975
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005023237	32.1839	20.1149	sciurus_vulgaris	ENSSVLP00005020573	34.7826	21.7391
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005016543	66.4122	59.542	sciurus_vulgaris	ENSSVLP00005020573	54.0373	48.4472
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005022042	64.4928	60.1449	sciurus_vulgaris	ENSSVLP00005020573	55.2795	51.5528

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	86.3354	83.8509	choloepus_hoffmanni	ENSCHOP00000004720	63.4703	61.6438
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	dasypus_novemcinctus	ENSDNOP00000011538	60.5263	60.5263
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	97.5155	96.8944	erinaceus_europaeus	ENSEEUP00000013268	64.6091	64.1975
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	76.3975	76.3975	echinops_telfairi	ENSETEP00000012566	50.6173	50.6173
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	callithrix_jacchus	ENSCJAP00000028461	57.0922	56.7376
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	papio_anubis	ENSPANP00000000733	62.1622	61.7761
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	mandrillus_leucophaeus	ENSMLEP00000006717	62.1622	61.7761
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	gorilla_gorilla	ENSGGOP00000006379	66.2551	65.8436
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	pan_troglodytes	ENSPTRP00000062955	66.2551	65.8436
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	pan_paniscus	ENSPPAP00000012063	66.2551	65.8436
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	96.8944	95.0311	pongo_abelii	ENSPPYP00000004215	59.542	58.3969
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	homo_sapiens	ENSP00000434643	66.2551	65.8436
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	canis_lupus_familiaris	ENSCAFP00845016559	66.2551	66.2551
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	ursus_americanus	ENSUAMP00000027871	66.2551	66.2551
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	vulpes_vulpes	ENSVVUP00000033702	66.2551	66.2551
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	mustela_putorius_furo	ENSMPUP00000009120	66.2551	66.2551
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	panthera_leo	ENSPLOP00000008668	66.2551	66.2551
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	panthera_pardus	ENSPPRP00000028833	66.2551	66.2551
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	felis_catus	ENSFCAP00000011080	66.2551	66.2551
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	delphinapterus_leucas	ENSDLEP00000003876	66.2551	65.8436
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	physeter_catodon	ENSPCTP00005017935	66.2551	65.8436
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	balaenoptera_musculus	ENSBMSP00010009113	66.2551	65.8436
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	equus_caballus	ENSECAP00000011789	57.2954	57.2954
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	72.6708	72.6708	procavia_capensis	ENSPCAP00000002830	48.1481	48.1481
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	sus_scrofa	ENSSSCP00000015774	61.4504	61.0687
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	capra_hircus	ENSCHIP00000009520	66.2551	65.8436
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	ovis_aries_rambouillet	ENSOARP00020006090	61.9231	61.5385
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	99.3789	99.3789	ochotona_princeps	ENSOPRP00000008678	65.8436	65.8436
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	oryctolagus_cuniculus	ENSOCUP00000018598	57.2954	57.2954
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	99.3789	99.3789	urocitellus_parryii	ENSUPAP00010016925	65.8436	65.8436
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	78.882	77.0186	cricetulus_griseus_chok1gshd	ENSCGRP00001003156	61.6505	60.1942
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	cricetulus_griseus_chok1gshd	ENSCGRP00001012207	57.2954	57.2954
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	mus_caroli	MGP_CAROLIEiJ_P0080837	66.2551	66.2551
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	mus_musculus	ENSMUSP00000032998	66.2551	66.2551
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	mus_spretus	MGP_SPRETEiJ_P0084207	66.2551	66.2551
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	mus_pahari	MGP_PahariEiJ_P0017676	66.2551	66.2551
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	96.8944	96.2733	rattus_norvegicus	ENSRNOP00000009988	64.1975	63.786
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	94.4099	93.1677	octodon_degus	ENSODEP00000003298	66.9604	66.0793
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	54.6584	51.5528	octodon_degus	ENSODEP00000002300	57.1429	53.8961
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	93.1677	91.9255	octodon_degus	ENSODEP00000000781	65.7895	64.9123
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	86.9565	83.2298	octodon_degus	ENSODEP00000001653	62.7803	60.0897
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	55.2795	51.5528	octodon_degus	ENSODEP00000004932	74.1667	69.1667
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	99.3789	98.1366	octodon_degus	ENSODEP00000009109	99.3789	98.1366
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	99.3789	99.3789	heterocephalus_glaber_female	ENSHGLP00000027191	65.8436	65.8436
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	microcebus_murinus	ENSMICP00000020936	66.2551	65.8436
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	chinchilla_lanigera	ENSCLAP00000020172	66.2551	66.2551
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	80.7453	79.5031	aotus_nancymaae	ENSANAP00000010942	57.7778	56.8889
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	saimiri_boliviensis_boliviensis	ENSSBOP00000010077	62.1622	61.7761
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	otolemur_garnettii	ENSOGAP00000004758	65.9836	65.5738
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	92.5466	92.5466	sorex_araneus	ENSSARP00000006343	61.8257	61.8257
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	phocoena_sinus	ENSPSNP00000008404	66.2551	65.8436
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	bison_bison_bison	ENSBBBP00000026767	62.4031	62.0155
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	jaculus_jaculus	ENSJJAP00000017418	66.2551	66.2551
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	94.4099	91.9255	carlito_syrichta	ENSTSYP00000018615	56.2963	54.8148
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	neovison_vison	ENSNVIP00000029223	66.2551	66.2551
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	microtus_ochrogaster	ENSMOCP00000007818	66.2551	66.2551
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	panthera_tigris_altaica	ENSPTIP00000012853	66.2551	66.2551
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	91.3043	91.3043	pteropus_vampyrus	ENSPVAP00000010626	60.7438	60.7438
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	catagonus_wagneri	ENSCWAP00000002419	61.4504	61.0687
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	nannospalax_galili	ENSNGAP00000014114	66.2551	66.2551
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	rhinopithecus_bieti	ENSRBIP00000043513	66.2551	65.8436
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	92.5466	91.9255	prolemur_simus	ENSPSMP00000026649	98.6755	98.0132
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	prolemur_simus	ENSPSMP00000003736	66.2551	65.8436
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	bos_mutus	ENSBMUP00000004815	62.4031	62.0155
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	cervus_hanglu_yarkandensis	ENSCHYP00000007057	41.4948	41.2371
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	chlorocebus_sabaeus	ENSCSAP00000000282	66.2551	65.8436
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	99.3789	99.3789	myotis_lucifugus	ENSMLUP00000003714	65.8436	65.8436
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	peromyscus_maniculatus_bairdii	ENSPEMP00000025262	66.2551	66.2551
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	rhinolophus_ferrumequinum	ENSRFEP00010027399	57.2954	57.2954
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	propithecus_coquereli	ENSPCOP00000031940	66.2551	65.8436
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	cebus_imitator	ENSCCAP00000008838	59.6296	59.2593
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	100	canis_lupus_dingo	ENSCAFP00020002483	66.2551	66.2551
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	rhinopithecus_roxellana	ENSRROP00000002484	66.2551	65.8436
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	100	99.3789	moschus_moschiferus	ENSMMSP00000013766	62.4031	62.0155
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	81.9876	69.5652	caenorhabditis_elegans	C23G10.3.1	53.4413	45.3441
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	83.8509	73.913	drosophila_melanogaster	FBpp0312066	54.878	48.374
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	85.0932	81.3665	ciona_intestinalis	ENSCINP00000010313	52.0913	49.8099
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	68.323	62.1118	petromyzon_marinus	ENSPMAP00000008596	55	50
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	88.1988	79.5031	eptatretus_burgeri	ENSEBUP00000005415	78.453	70.7182
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	97.5155	96.8944	callorhinchus_milii	ENSCMIP00000043843	62.8	62.4
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	97.5155	93.7888	fundulus_heteroclitus	ENSFHEP00000034432	64.0816	61.6327
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	97.5155	96.8944	notechis_scutatus	ENSNSUP00000023821	64.6091	64.1975
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	97.5155	96.8944	pseudonaja_textilis	ENSPTXP00000021463	64.6091	64.1975
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	80.1242	77.0186	naja_naja	ENSNNAP00000012024	51.6	49.6
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	85.0932	80.1242	ciona_savignyi	ENSCSAVP00000005843	53.3074	50.1946
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	72.0497	62.1118	saccharomyces_cerevisiae	YNL178W	48.3333	41.6667
ENSSVLG00005016411	sciurus_vulgaris	ENSSVLP00005020573	96.8944	95.0311	nothobranchius_furzeri	ENSNFUP00015032038	61.9048	60.7143

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression