Description

Ensembl ID ENSSVLG00005013232 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 2496 bases Strand Minus strand
Position 9 : 28656139 - 28658634 RNA binding domain CAF1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSVLP00005016617 CAF1 PF04857 1.5e-73 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSVLT00005018472 1560 519aa ENSSVLP00005016617

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501855293.973693.032sciurus_vulgarisENSSVLP0000501661796.146495.183
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000503220836.520420.6897sciurus_vulgarisENSSVLP0000501661744.89425.4335
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000500789126.274515.6863sciurus_vulgarisENSSVLP0000501661725.818915.4143

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661773.603158.5742ornithorhynchus_anatinusENSOANP0000001931270.479756.0886
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661784.007771.869sarcophilus_harrisiiENSSHAP0000001789674.914164.0893
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661749.71140.2697notamacropus_eugeniiENSMEUP0000001086356.08745.4348
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661738.92133.7187notamacropus_eugeniiENSMEUP0000001280370.138960.7639
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661789.980782.2736dasypus_novemcinctusENSDNOP0000001064287.78280.2632
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661750.674445.6647erinaceus_europaeusENSEEUP0000000523363.526657.2464
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661777.26468.4008echinops_telfairiENSETEP0000000616580.846871.5726
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661789.788181.3102callithrix_jacchusENSCJAP0000002183787.924579.6226
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.751482.659cercocebus_atysENSCATP0000001879788.700680.791
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661778.4269.9422macaca_fascicularisENSMFAP0000006343372.808664.9374
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661791.136883.237macaca_mulattaENSMMUP0000000559683.128375.9227
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661791.136883.237macaca_nemestrinaENSMNEP0000002097889.077281.3559
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661791.136883.237papio_anubisENSPANP0000001860189.077281.3559
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661787.475979.5761mandrillus_leucophaeusENSMLEP0000004007188.49980.5068
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.751483.237gorilla_gorillaENSGGOP0000001921488.700681.3559
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.751482.8516pan_troglodytesENSPTRP0000008688188.700680.9793
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.751482.8516pan_paniscusENSPPAP0000000740288.700680.9793
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661789.2182.659pongo_abeliiENSPPYP0000001920489.038582.5
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661791.329583.4297homo_sapiensENSP0000037600789.265581.5443
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661791.329585.9345canis_lupus_familiarisENSCAFP0084500279189.265583.9925
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661780.154173.025ursus_americanusENSUAMP0000001997678.638971.6446
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661789.980784.2004vulpes_vulpesENSVVUP0000000880378.619573.569
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.558884.5857ailuropoda_melanoleucaENSAMEP0000001622888.512282.6742
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.366184.2004mustela_putorius_furoENSMPUP0000000488088.323982.2976
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.944184.9711panthera_leoENSPLOP0000000522088.888983.0508
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.944184.7784panthera_pardusENSPPRP0000002225288.888982.8625
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661791.136884.9711felis_catusENSFCAP0000000262189.077283.0508
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661763.391157.2254tursiops_truncatusENSTTRP0000000987262.075556.0377
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661783.622476.3006delphinapterus_leucasENSDLEP0000001825782.982875.717
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661755.491351.4451physeter_catodonENSPCTP0000503103084.210578.0702
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661789.402782.0809balaenoptera_musculusENSBMSP0001001512387.547280.3774
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661753.371948.7476loxodonta_africanaENSLAFP0000002377681.231774.1936
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.558884.7784equus_caballusENSECAP0000004481888.512282.8625
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.558884.7784equus_asinusENSEASP0000504991888.512282.8625
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661781.695673.025procavia_capensisENSPCAP000000132888071.5094
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.751484.5857sus_scrofaENSSSCP0000000437288.700682.6742
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661789.980782.4663camelus_dromedariusENSCDRP0000502123287.947380.6026
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.173482.8516bos_taurusENSBTAP0000002018088.468881.2854
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661789.2181.8882capra_hircusENSCHIP0000000165587.358580.1887
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661789.980782.4663ovis_aries_rambouilletENSOARP0002000828388.783381.3688
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661768.786163.3911ochotona_princepsENSOPRP0000000351967.231661.9586
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661795.375793.4489marmota_marmota_marmotaENSMMMP0000001080993.220391.3371
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.173484.0077oryctolagus_cuniculusENSOCUP0000001192988.135682.1092
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661786.512579.5761dipodomys_ordiiENSDORP0000001082585.68778.8168
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661794.797793.0636urocitellus_parryiiENSUPAP0001000845592.655490.9604
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661789.595479.3834cricetulus_griseus_chok1gshdENSCGRP0000100566487.40677.4436
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661773.410465.3179cricetulus_griseus_chok1gshdENSCGRP0000100998083.369874.1794
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661773.795864.9326mesocricetus_auratusENSMAUP0000001182381.489471.7021
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.944184.7784mus_caroliMGP_CAROLIEiJ_P004265988.888982.8625
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.944184.5857mus_musculusENSMUSP0000012937788.888982.6742
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.558884.5857mus_spretusMGP_SPRETEiJ_P004461388.512282.6742
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661791.907585.1638mus_pahariMGP_PahariEiJ_P005494989.830583.2392
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.944184.5857mus_spicilegusENSMSIP0000003193788.888982.6742
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661791.136884.9711rattus_norvegicusENSRNOP0000005715789.077283.0508
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661785.163878.42cavia_porcellusENSCPOP0000001554385.328278.5714
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661789.788183.815octodon_degusENSODEP0000001080087.758981.9209
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661783.429771.6763monodelphis_domesticaENSMODP0000000920881.238369.7936
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661769.556858.3815vombatus_ursinusENSVURP0001002486579.166766.4474
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661783.622472.0617vombatus_ursinusENSVURP0001002358081.273470.0375
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.944184.7784heterocephalus_glaber_femaleENSHGLP0000000960478.275372.9685
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661782.851676.6859ursus_maritimusENSUMAP0000001620086.519180.0805
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661791.329584.2004bos_indicus_hybridENSBIXP0000501082879.264273.0769
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661788.824781.6956bos_grunniensENSBGRP0000004231189.168382.0116
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661791.522283.0443microcebus_murinusENSMICP0000000731789.453981.1676
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661789.980782.8516chinchilla_lanigeraENSCLAP0000000453687.947380.9793
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661784.393172.6397phascolarctos_cinereusENSPCIP0000003150182.176470.7317
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.173482.0809aotus_nancymaaeENSANAP0000003415888.135680.226
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.751483.0443saimiri_boliviensis_boliviensisENSSBOP0000000490988.700681.1676
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661791.329584.7784otolemur_garnettiiENSOGAP0000000656889.60383.1758
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661779.768873.7958tupaia_belangeriENSTBEP0000000791879.615473.6538
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.366183.0443monodon_monocerosENSMMNP0001501546388.323981.1676
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.366182.4663phocoena_sinusENSPSNP0000002480988.323980.6026
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661795.18393.6416ictidomys_tridecemlineatusENSSTOP0000000501293.03291.5254
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.944184.0077bison_bison_bisonENSBBBP0000001831189.056682.2642
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661785.741878.0347jaculus_jaculusENSJJAP0000000498585.907378.1853
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661789.402781.6956carlito_syrichtaENSTSYP0000000513787.382379.8493
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.173484.7784neovison_visonENSNVIP0000001317188.135682.8625
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.366183.6224microtus_ochrogasterENSMOCP0000001494887.992581.4259
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661787.283281.1175panthera_tigris_altaicaENSPTIP0000001092287.620981.4313
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661768.978864.7399pteropus_vampyrusENSPVAP0000000504267.547263.3962
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.751483.815catagonus_wagneriENSCWAP0000000385988.700681.9209
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661791.136885.5491nannospalax_galiliENSNGAP0000001722488.909883.4586
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661788.824782.0809nomascus_leucogenysENSNLEP0000001374088.653881.9231
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.944182.8516rhinopithecus_bietiENSRBIP0000001964288.888980.9793
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.751483.815prolemur_simusENSPSMP0000002761888.700681.9209
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661791.136883.815bos_mutusENSBMUP0000000374089.077281.9209
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661791.714884.9711cervus_hanglu_yarkandensisENSCHYP0000003411589.642283.0508
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661789.788181.8882chlorocebus_sabaeusENSCSAP0000000862889.27281.4176
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.366182.4663myotis_lucifugusENSMLUP0000000068088.323980.6026
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661791.329585.3565peromyscus_maniculatus_bairdiiENSPEMP0000001736389.097783.2707
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661788.824782.8516rhinolophus_ferrumequinumENSRFEP0001000950589.863583.8207
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661789.595482.2736propithecus_coquereliENSPCOP0000002664587.570680.4143
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661790.751482.8516cebus_imitatorENSCCAP0000001685788.700680.9793
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661788.824783.4297canis_lupus_dingoENSCAFP0002002248488.145382.7916
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661789.980782.0809rhinopithecus_roxellanaENSRROP0000004141889.807781.9231
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661791.522282.659moschus_moschiferusENSMMSP0000000310089.453980.791
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661740.655121.7726caenorhabditis_elegansK10C8.1.137.279219.9647
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661748.169628.7091eptatretus_burgeriENSEBUP0000001280147.709928.4351
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661774.566560.501chrysemys_picta_belliiENSCPBP0000000502776.181161.811
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661776.300661.2717crocodylus_porosusENSCPRP0000502558274.576359.887
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661745.086736.2235sphenodon_punctatusENSSPUP0000000609776.470661.4379
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661722.928717.341notechis_scutatusENSNSUP0000002164065.027349.1803
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661736.416226.975pseudonaja_textilisENSPTXP0000000190964.72647.9452
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661773.217757.4181anas_platyrhynchos_platyrhynchosENSAPLP0000000662971.16155.8052
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661770.520256.0694gallus_gallusENSGALP0001000600264.436651.2324
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661761.271748.7476meleagris_gallopavoENSMGAP0000001313962.475449.7053
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661771.86956.0694parus_majorENSPMJP0000001213870.377454.9057
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661743.930632.948serinus_canariaENSSCAP0000001537068.882251.6616
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661741.618532.948pelodiscus_sinensisENSPSIP0000001267872.483257.3825
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661770.905656.4547anolis_carolinensisENSACAP0000001343069.565255.3875
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661757.610844.7013naja_najaENSNNAP0000002146369.373653.8283
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661761.65745.0867geospiza_fortisENSGFOP0000000826568.230349.8934
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661772.254355.8767taeniopygia_guttataENSTGUP0000001177270.621554.6139
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661772.639756.6474aquila_chrysaetos_chrysaetosENSACCP0002000723970.467354.9533
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661744.89435.4528chelonoidis_abingdoniiENSCABP0000002465771.692356.6154
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661763.391149.5183salvator_merianaeENSSMRP0000002888055.857443.6333
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661769.749554.1426ficedula_albicollisENSFALP0000001261271.825455.754
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661770.134955.684coturnix_japonicaENSCJPP0000500558562.11649.3174
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661767.244752.7938podarcis_muralisENSPMRP0000000117368.565853.831
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661773.795857.9961anser_brachyrhynchusENSABRP0000002041671.857456.4728
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661761.849747.2062struthio_camelus_australisENSSCUP0000002474970.704853.9648
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661768.015453.5645terrapene_carolina_triunguisENSTMTP0000000090972.040856.7347
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661741.233130.2505strigops_habroptilaENSSHBP0000501317964.848547.5758
ENSSVLG00005013232sciurus_vulgarisENSSVLP0000501661774.951861.4644gopherus_evgoodeiENSGEVP0000502949277.33663.4195

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression