RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSSVLG00005013164	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	754 bases	Strand	Plus strand
Position	1 : 122716594 - 122717347	RNA binding domain	KH_2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSVLP00005016543	KH_2	PF07650	7.4e-07	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSSVLT00005018389	396	131aa	ENSSVLP00005016543

Gene Model

Click here to download ENSSVLG00005013164's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSVLG00005013164's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005022042	63.7681	57.971	sciurus_vulgaris	ENSSVLP00005016543	67.1756	61.0687
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005023237	21.2644	10.3448	sciurus_vulgaris	ENSSVLP00005016543	28.2443	13.7405
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005020573	54.0373	48.4472	sciurus_vulgaris	ENSSVLP00005016543	66.4122	59.542
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005026776	52.027	45.9459	sciurus_vulgaris	ENSSVLP00005016543	58.7786	51.9084
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005008542	60.9756	53.6585	sciurus_vulgaris	ENSSVLP00005016543	38.1679	33.5878
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005028030	39.9225	35.2713	sciurus_vulgaris	ENSSVLP00005016543	78.626	69.4657
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005009016	56.1644	49.3151	sciurus_vulgaris	ENSSVLP00005016543	62.5954	54.9618

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	60.3053	54.9618	sarcophilus_harrisii	ENSSHAP00000027499	43.6464	39.779
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	69.4657	59.542	dasypus_novemcinctus	ENSDNOP00000030531	37.7593	32.3651
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	65.6489	56.4885	dasypus_novemcinctus	ENSDNOP00000022368	37.8855	32.5991
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	60.3053	52.6718	callithrix_jacchus	ENSCJAP00000084801	50	43.6709
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	67.1756	57.2519	cercocebus_atys	ENSCATP00000029277	36.3636	30.9917
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	52.6718	44.2748	cercocebus_atys	ENSCATP00000038390	47.9167	40.2778
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	52.6718	44.2748	macaca_fascicularis	ENSMFAP00000004486	47.9167	40.2778
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	50.3817	46.5649	macaca_nemestrina	ENSMNEP00000021409	53.6585	49.5935
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	67.1756	57.2519	mandrillus_leucophaeus	ENSMLEP00000016878	34.375	29.2969
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	54.1985	49.6183	gorilla_gorilla	ENSGGOP00000039304	61.2069	56.0345
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	74.0458	61.8321	pan_troglodytes	ENSPTRP00000062099	35.9259	30
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	76.3359	64.8855	pan_troglodytes	ENSPTRP00000026978	37.3134	31.7164
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	48.855	41.2214	pan_troglodytes	ENSPTRP00000076878	46.0432	38.8489
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	75.5725	64.1221	pan_paniscus	ENSPPAP00000020965	39.6	33.6
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	49.6183	41.9847	pan_paniscus	ENSPPAP00000004806	45.7746	38.7324
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	74.0458	61.8321	pan_paniscus	ENSPPAP00000033446	38.3399	32.0158
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	64.1221	53.4351	pongo_abelii	ENSPPYP00000037981	52.1739	43.4783
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	55.7252	48.855	pongo_abelii	ENSPPYP00000035515	44.2424	38.7879
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	37.4046	32.8244	canis_lupus_familiaris	ENSCAFP00845035366	55.6818	48.8636
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	44.2748	38.9313	ursus_americanus	ENSUAMP00000008796	63.0435	55.4348
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	45.0382	38.1679	ailuropoda_melanoleuca	ENSAMEP00000007693	64.1304	54.3478
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	45.0382	38.1679	panthera_leo	ENSPLOP00000015256	63.4409	53.7634
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	52.6718	50.3817	panthera_pardus	ENSPPRP00000023523	53.4884	51.1628
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	43.5115	37.4046	panthera_pardus	ENSPPRP00000016140	60	51.5789
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	42.7481	35.8779	felis_catus	ENSFCAP00000031202	59.5745	50
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	51.9084	47.3282	delphinapterus_leucas	ENSDLEP00000004689	73.1183	66.6667
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	56.4885	51.9084	physeter_catodon	ENSPCTP00005026296	41.8079	38.4181
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	41.2214	36.6412	balaenoptera_musculus	ENSBMSP00010013447	49.5413	44.0367
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	9.92366	5.34351	sus_scrofa	ENSSSCP00000080961	9.92366	5.34351
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	76.3359	67.9389	camelus_dromedarius	ENSCDRP00005004685	34.6021	30.7958
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	41.9847	36.6412	bos_taurus	ENSBTAP00000067411	64.7059	56.4706
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	54.9618	48.855	capra_hircus	ENSCHIP00000024183	34.7826	30.9179
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	45.8015	41.2214	ovis_aries_rambouillet	ENSOARP00020004567	57.1429	51.4286
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	68.7023	61.8321	dipodomys_ordii	ENSDORP00000017589	71.4286	64.2857
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	5.34351	2.29008	urocitellus_parryii	ENSUPAP00010004487	7.36842	3.15789
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	47.3282	41.9847	rattus_norvegicus	ENSRNOP00000088971	48.4375	42.9688
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	54.1985	49.6183	octodon_degus	ENSODEP00000017786	60.1695	55.0847
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	53.4351	46.5649	vombatus_ursinus	ENSVURP00010023734	56.9106	49.5935
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	43.5115	38.1679	ursus_maritimus	ENSUMAP00000018377	61.9565	54.3478
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	41.9847	36.6412	bos_indicus_hybrid	ENSBIXP00005033977	64.7059	56.4706
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	65.6489	57.2519	microcebus_murinus	ENSMICP00000025588	35.5372	30.9917
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	48.855	42.7481	phascolarctos_cinereus	ENSPCIP00000035653	62.1359	54.3689
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	52.6718	47.3282	aotus_nancymaae	ENSANAP00000003886	67.6471	60.7843
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	53.4351	46.5649	otolemur_garnettii	ENSOGAP00000016162	59.8291	52.1368
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	68.7023	63.3588	monodon_monoceros	ENSMMNP00015017835	57.6923	53.2051
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	51.145	45.8015	phocoena_sinus	ENSPSNP00000031133	72.043	64.5161
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	58.0153	51.145	bison_bison_bison	ENSBBBP00000021043	53.5211	47.1831
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	61.8321	51.145	jaculus_jaculus	ENSJJAP00000023571	56.6434	46.8531
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	71.7557	61.0687	nomascus_leucogenys	ENSNLEP00000046818	36.1538	30.7692
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	55.7252	48.0916	nomascus_leucogenys	ENSNLEP00000048836	55.303	47.7273
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	67.1756	62.5954	rhinopithecus_bieti	ENSRBIP00000037360	61.5385	57.3427
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	41.9847	36.6412	bos_mutus	ENSBMUP00000030561	64.7059	56.4706
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	50.3817	46.5649	cervus_hanglu_yarkandensis	ENSCHYP00000011192	57.8947	53.5088
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	54.1985	48.855	cervus_hanglu_yarkandensis	ENSCHYP00000026157	60.6838	54.7009
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	67.9389	61.8321	peromyscus_maniculatus_bairdii	ENSPEMP00000023759	58.9404	53.6424
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	47.3282	41.9847	rhinolophus_ferrumequinum	ENSRFEP00010021039	52.9915	47.0085
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	50.3817	45.8015	propithecus_coquereli	ENSPCOP00000020030	70.9677	64.5161
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	61.8321	51.9084	cebus_imitator	ENSCCAP00000010734	37.5	31.4815
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	37.4046	32.8244	canis_lupus_dingo	ENSCAFP00020005404	55.6818	48.8636
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	67.1756	62.5954	rhinopithecus_roxellana	ENSRROP00000032658	61.5385	57.3427
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	67.1756	56.4885	caenorhabditis_elegans	C23G10.3.1	35.6275	29.9595
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	70.229	55.7252	drosophila_melanogaster	FBpp0312066	37.3984	29.6748
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	70.229	57.2519	ciona_intestinalis	ENSCINP00000010313	34.981	28.5171
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	67.1756	58.0153	petromyzon_marinus	ENSPMAP00000008596	44	38
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	58.0153	48.0916	eptatretus_burgeri	ENSEBUP00000005415	41.9889	34.8066
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	77.8626	68.7023	callorhinchus_milii	ENSCMIP00000043843	40.8	36
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	71.7557	64.8855	electrophorus_electricus	ENSEEEP00000050010	41.048	37.1179
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	76.3359	68.7023	salmo_trutta	ENSSTUP00000047749	37.594	33.8346
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	78.626	68.7023	fundulus_heteroclitus	ENSFHEP00000034432	42.0408	36.7347
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	76.3359	67.9389	notechis_scutatus	ENSNSUP00000023821	41.1523	36.6255
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	76.3359	67.9389	pseudonaja_textilis	ENSPTXP00000021463	41.1523	36.6255
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	73.2824	66.4122	meleagris_gallopavo	ENSMGAP00000027896	37.5	33.9844
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	45.8015	40.458	oryzias_melastigma	ENSOMEP00000012448	61.8557	54.6392
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	69.4657	57.2519	ciona_savignyi	ENSCSAVP00000005843	35.4086	29.1829
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	38.1679	32.0611	pundamilia_nyererei	ENSPNYP00000009854	58.1395	48.8372
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	55.7252	48.855	tetraodon_nigroviridis	ENSTNIP00000008772	38.2199	33.5079
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	72.5191	65.6489	leptobrachium_leishanense	ENSLLEP00000009625	36.2595	32.8244
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	67.1756	50.3817	saccharomyces_cerevisiae	YNL178W	36.6667	27.5
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	3.81679	2.29008	acanthochromis_polyacanthus	ENSAPOP00000000342	7.35294	4.41176
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	51.145	46.5649	acanthochromis_polyacanthus	ENSAPOP00000021148	67	61
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	74.8092	67.1756	oncorhynchus_tshawytscha	ENSOTSP00005076097	38.7352	34.7826
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	38.9313	35.1145	seriola_lalandi_dorsalis	ENSSLDP00000011405	68	61.3333
ENSSVLG00005013164	sciurus_vulgaris	ENSSVLP00005016543	77.0992	68.7023	nothobranchius_furzeri	ENSNFUP00015032038	40.0794	35.7143

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression