RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSTUG00000048269 | Gene ID |
115177320 |
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
40S ribosomal protein S27-like |
Status |
Confidence |
Length |
5583 bases |
Strand |
Minus strand |
Position |
37 : 1480195 - 1485777 |
RNA binding domain |
Ribosomal_S27e |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSTUP00000108629 |
Ribosomal_S27e |
PF01667 |
1.9e-29 |
1 |
ENSSTUP00000108638 |
Ribosomal_S27e |
PF01667 |
1.8e-27 |
1 |
ENSSTUP00000108623 |
Ribosomal_S27e |
PF01667 |
7.4e-27 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSTUT00000116328 |
1350 |
134aa |
ENSSTUP00000108623 |
- |
ENSSTUT00000116335 |
1305 |
119aa |
ENSSTUP00000108629 |
- |
ENSSTUT00000116344 |
1362 |
103aa |
ENSSTUP00000108638 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSTUG00000048269 | salmo_trutta | ENSSTUP00000074714 | 69.0722 | 60.8247 | salmo_trutta | ENSSTUP00000108623 | 50 | 44.0299 |
ENSSTUG00000048269 | salmo_trutta | ENSSTUP00000094046 | 65.8915 | 64.3411 | salmo_trutta | ENSSTUP00000108623 | 63.4328 | 61.9403 |
ENSSTUG00000048269 | salmo_trutta | ENSSTUP00000084477 | 98.8095 | 96.4286 | salmo_trutta | ENSSTUP00000108623 | 61.9403 | 60.4478 |
ENSSTUG00000048269 | salmo_trutta | ENSSTUP00000083749 | 86.7924 | 79.2453 | salmo_trutta | ENSSTUP00000108623 | 68.6567 | 62.6866 |
ENSSTUG00000048269 | salmo_trutta | ENSSTUP00000014325 | 82.1429 | 75 | salmo_trutta | ENSSTUP00000108623 | 51.4925 | 47.0149 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSTUG00000048269 | salmo_trutta | ENSSTUP00000108623 | 57.4627 | 55.9701 | latimeria_chalumnae | ENSLACP00000014383 | 91.6667 | 89.2857 |
ENSSTUG00000048269 | salmo_trutta | ENSSTUP00000108623 | 61.194 | 59.7015 | carassius_auratus | ENSCARP00000112729 | 45.5556 | 44.4444 |
ENSSTUG00000048269 | salmo_trutta | ENSSTUP00000108623 | 55.2239 | 52.2388 | esox_lucius | ENSELUP00000070869 | 78.7234 | 74.4681 |
ENSSTUG00000048269 | salmo_trutta | ENSSTUP00000108623 | 87.3134 | 86.5672 | oncorhynchus_mykiss | ENSOMYP00000002310 | 98.3193 | 97.479 |
ENSSTUG00000048269 | salmo_trutta | ENSSTUP00000108623 | 88.806 | 88.806 | salmo_salar | ENSSSAP00000016655 | 100 | 100 |
ENSSTUG00000048269 | salmo_trutta | ENSSTUP00000108623 | 66.4179 | 62.6866 | xiphophorus_maculatus | ENSXMAP00000016111 | 46.5969 | 43.9791 |
ENSSTUG00000048269 | salmo_trutta | ENSSTUP00000108623 | 58.9552 | 57.4627 | cyclopterus_lumpus | ENSCLMP00005003536 | 94.0476 | 91.6667 |
ENSSTUG00000048269 | salmo_trutta | ENSSTUP00000108623 | 58.9552 | 55.9701 | scophthalmus_maximus | ENSSMAP00000059545 | 70.5357 | 66.9643 |
ENSSTUG00000048269 | salmo_trutta | ENSSTUP00000108623 | 59.7015 | 58.209 | cottoperca_gobio | ENSCGOP00000014639 | 95.2381 | 92.8571 |
ENSSTUG00000048269 | salmo_trutta | ENSSTUP00000108623 | 61.9403 | 58.9552 | xenopus_tropicalis | ENSXETP00000053425 | 56.0811 | 53.3784 |
ENSSTUG00000048269 | salmo_trutta | ENSSTUP00000108623 | 58.9552 | 56.7164 | fundulus_heteroclitus | ENSFHEP00000033815 | 59.3985 | 57.1429 |
ENSSTUG00000048269 | salmo_trutta | ENSSTUP00000108623 | 55.9701 | 55.2239 | sander_lucioperca | ENSSLUP00000028133 | 78.9474 | 77.8947 |
ENSSTUG00000048269 | salmo_trutta | ENSSTUP00000108623 | 58.9552 | 57.4627 | labrus_bergylta | ENSLBEP00000000334 | 94.0476 | 91.6667 |
ENSSTUG00000048269 | salmo_trutta | ENSSTUP00000108623 | 58.209 | 56.7164 | ciona_savignyi | ENSCSAVP00000008994 | 92.8571 | 90.4762 |
ENSSTUG00000048269 | salmo_trutta | ENSSTUP00000108623 | 58.9552 | 58.209 | hippocampus_comes | ENSHCOP00000020971 | 94.0476 | 92.8571 |
ENSSTUG00000048269 | salmo_trutta | ENSSTUP00000108623 | 58.209 | 57.4627 | larimichthys_crocea | ENSLCRP00005021775 | 92.8571 | 91.6667 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |