Description

Ensembl ID ENSSTUG00000048269 Gene ID 115177320 Accession -
Symbol Alias - Full Name 40S ribosomal protein S27-like
Status Confidence Length 5583 bases Strand Minus strand
Position 37 : 1480195 - 1485777 RNA binding domain Ribosomal_S27e
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSTUP00000108629 Ribosomal_S27e PF01667 1.9e-29 1
ENSSTUP00000108638 Ribosomal_S27e PF01667 1.8e-27 1
ENSSTUP00000108623 Ribosomal_S27e PF01667 7.4e-27 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSTUT00000116328 1350 134aa ENSSTUP00000108623
- ENSSTUT00000116335 1305 119aa ENSSTUP00000108629
- ENSSTUT00000116344 1362 103aa ENSSTUP00000108638

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSTUG00000048269salmo_truttaENSSTUP0000007471469.072260.8247salmo_truttaENSSTUP000001086235044.0299
ENSSTUG00000048269salmo_truttaENSSTUP0000009404665.891564.3411salmo_truttaENSSTUP0000010862363.432861.9403
ENSSTUG00000048269salmo_truttaENSSTUP0000008447798.809596.4286salmo_truttaENSSTUP0000010862361.940360.4478
ENSSTUG00000048269salmo_truttaENSSTUP0000008374986.792479.2453salmo_truttaENSSTUP0000010862368.656762.6866
ENSSTUG00000048269salmo_truttaENSSTUP0000001432582.142975salmo_truttaENSSTUP0000010862351.492547.0149

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSTUG00000048269salmo_truttaENSSTUP0000010862357.462755.9701latimeria_chalumnaeENSLACP0000001438391.666789.2857
ENSSTUG00000048269salmo_truttaENSSTUP0000010862361.19459.7015carassius_auratusENSCARP0000011272945.555644.4444
ENSSTUG00000048269salmo_truttaENSSTUP0000010862355.223952.2388esox_luciusENSELUP0000007086978.723474.4681
ENSSTUG00000048269salmo_truttaENSSTUP0000010862387.313486.5672oncorhynchus_mykissENSOMYP0000000231098.319397.479
ENSSTUG00000048269salmo_truttaENSSTUP0000010862388.80688.806salmo_salarENSSSAP00000016655100100
ENSSTUG00000048269salmo_truttaENSSTUP0000010862366.417962.6866xiphophorus_maculatusENSXMAP0000001611146.596943.9791
ENSSTUG00000048269salmo_truttaENSSTUP0000010862358.955257.4627cyclopterus_lumpusENSCLMP0000500353694.047691.6667
ENSSTUG00000048269salmo_truttaENSSTUP0000010862358.955255.9701scophthalmus_maximusENSSMAP0000005954570.535766.9643
ENSSTUG00000048269salmo_truttaENSSTUP0000010862359.701558.209cottoperca_gobioENSCGOP0000001463995.238192.8571
ENSSTUG00000048269salmo_truttaENSSTUP0000010862361.940358.9552xenopus_tropicalisENSXETP0000005342556.081153.3784
ENSSTUG00000048269salmo_truttaENSSTUP0000010862358.955256.7164fundulus_heteroclitusENSFHEP0000003381559.398557.1429
ENSSTUG00000048269salmo_truttaENSSTUP0000010862355.970155.2239sander_luciopercaENSSLUP0000002813378.947477.8947
ENSSTUG00000048269salmo_truttaENSSTUP0000010862358.955257.4627labrus_bergyltaENSLBEP0000000033494.047691.6667
ENSSTUG00000048269salmo_truttaENSSTUP0000010862358.20956.7164ciona_savignyiENSCSAVP0000000899492.857190.4762
ENSSTUG00000048269salmo_truttaENSSTUP0000010862358.955258.209hippocampus_comesENSHCOP0000002097194.047692.8571
ENSSTUG00000048269salmo_truttaENSSTUP0000010862358.20957.4627larimichthys_croceaENSLCRP0000502177592.857191.6667

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression