Description

Ensembl ID ENSSTUG00000041934 Gene ID 115177469 Accession -
Symbol Alias - Full Name 40S ribosomal protein S27-like
Status Confidence Length 4863 bases Strand Plus strand
Position 37 : 2193675 - 2198537 RNA binding domain Ribosomal_S27e
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSTUP00000094074 Ribosomal_S27e PF01667 9.4e-30 1
ENSSTUP00000094090 Ribosomal_S27e PF01667 1.6e-27 1
ENSSTUP00000094102 Ribosomal_S27e PF01667 5.8e-27 1
ENSSTUP00000094046 Ribosomal_S27e PF01667 7.5e-27 1
ENSSTUP00000094117 Ribosomal_S27e PF01667 1.5e-26 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSTUT00000100669 665 129aa ENSSTUP00000094046
- ENSSTUT00000100698 1200 91aa ENSSTUP00000094074
- ENSSTUT00000100715 957 97aa ENSSTUP00000094090
- ENSSTUT00000100740 1080 119aa ENSSTUP00000094102
- ENSSTUT00000100764 447 101aa ENSSTUP00000094117

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSTUG00000041934salmo_truttaENSSTUP0000007471467.010360.8247salmo_truttaENSSTUP0000009404650.387645.7364
ENSSTUG00000041934salmo_truttaENSSTUP0000010862363.432861.9403salmo_truttaENSSTUP0000009404665.891564.3411
ENSSTUG00000041934salmo_truttaENSSTUP0000008447790.476286.9048salmo_truttaENSSTUP0000009404658.914756.5891
ENSSTUG00000041934salmo_truttaENSSTUP0000008374970.754767.9245salmo_truttaENSSTUP0000009404658.139555.814
ENSSTUG00000041934salmo_truttaENSSTUP0000001432579.761970.2381salmo_truttaENSSTUP0000009404651.93845.7364

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSTUG00000041934salmo_truttaENSSTUP0000009404657.364354.2636latimeria_chalumnaeENSLACP0000001438388.095283.3333
ENSSTUG00000041934salmo_truttaENSSTUP0000009404657.364356.5891carassius_auratusENSCARP0000011272941.111140.5556
ENSSTUG00000041934salmo_truttaENSSTUP0000009404655.038851.938esox_luciusENSELUP0000007086975.531971.2766
ENSSTUG00000041934salmo_truttaENSSTUP0000009404658.914758.1395oncorhynchus_kisutchENSOKIP0000500104477.55176.5306
ENSSTUG00000041934salmo_truttaENSSTUP0000009404659.689957.3643xiphophorus_maculatusENSXMAP0000001611140.314138.7435
ENSSTUG00000041934salmo_truttaENSSTUP0000009404658.914755.814cyclopterus_lumpusENSCLMP0000500353690.476285.7143
ENSSTUG00000041934salmo_truttaENSSTUP0000009404657.364355.814scophthalmus_maximusENSSMAP0000005954566.071464.2857
ENSSTUG00000041934salmo_truttaENSSTUP0000009404659.689956.5891cottoperca_gobioENSCGOP0000001463991.666786.9048
ENSSTUG00000041934salmo_truttaENSSTUP0000009404657.364355.0388xenopus_tropicalisENSXETP000000534255047.973
ENSSTUG00000041934salmo_truttaENSSTUP0000009404662.790757.3643fundulus_heteroclitusENSFHEP0000003381560.902355.6391
ENSSTUG00000041934salmo_truttaENSSTUP0000009404686.821782.9457hucho_huchoENSHHUP0000001345173.202669.9346
ENSSTUG00000041934salmo_truttaENSSTUP0000009404658.139555.814sander_luciopercaENSSLUP0000002813378.947475.7895
ENSSTUG00000041934salmo_truttaENSSTUP0000009404658.914755.814labrus_bergyltaENSLBEP0000000033490.476285.7143
ENSSTUG00000041934salmo_truttaENSSTUP0000009404658.139555.0388ciona_savignyiENSCSAVP0000000899489.285784.5238
ENSSTUG00000041934salmo_truttaENSSTUP0000009404658.914756.5891hippocampus_comesENSHCOP0000002097190.476286.9048
ENSSTUG00000041934salmo_truttaENSSTUP0000009404658.139555.814larimichthys_croceaENSLCRP0000502177589.285785.7143

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression