RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSTUG00000041934 | Gene ID |
115177469 |
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
40S ribosomal protein S27-like |
Status |
Confidence |
Length |
4863 bases |
Strand |
Plus strand |
Position |
37 : 2193675 - 2198537 |
RNA binding domain |
Ribosomal_S27e |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSTUP00000094074 |
Ribosomal_S27e |
PF01667 |
9.4e-30 |
1 |
ENSSTUP00000094090 |
Ribosomal_S27e |
PF01667 |
1.6e-27 |
1 |
ENSSTUP00000094102 |
Ribosomal_S27e |
PF01667 |
5.8e-27 |
1 |
ENSSTUP00000094046 |
Ribosomal_S27e |
PF01667 |
7.5e-27 |
1 |
ENSSTUP00000094117 |
Ribosomal_S27e |
PF01667 |
1.5e-26 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSTUT00000100669 |
665 |
129aa |
ENSSTUP00000094046 |
- |
ENSSTUT00000100698 |
1200 |
91aa |
ENSSTUP00000094074 |
- |
ENSSTUT00000100715 |
957 |
97aa |
ENSSTUP00000094090 |
- |
ENSSTUT00000100740 |
1080 |
119aa |
ENSSTUP00000094102 |
- |
ENSSTUT00000100764 |
447 |
101aa |
ENSSTUP00000094117 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSTUG00000041934 | salmo_trutta | ENSSTUP00000074714 | 67.0103 | 60.8247 | salmo_trutta | ENSSTUP00000094046 | 50.3876 | 45.7364 |
ENSSTUG00000041934 | salmo_trutta | ENSSTUP00000108623 | 63.4328 | 61.9403 | salmo_trutta | ENSSTUP00000094046 | 65.8915 | 64.3411 |
ENSSTUG00000041934 | salmo_trutta | ENSSTUP00000084477 | 90.4762 | 86.9048 | salmo_trutta | ENSSTUP00000094046 | 58.9147 | 56.5891 |
ENSSTUG00000041934 | salmo_trutta | ENSSTUP00000083749 | 70.7547 | 67.9245 | salmo_trutta | ENSSTUP00000094046 | 58.1395 | 55.814 |
ENSSTUG00000041934 | salmo_trutta | ENSSTUP00000014325 | 79.7619 | 70.2381 | salmo_trutta | ENSSTUP00000094046 | 51.938 | 45.7364 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSTUG00000041934 | salmo_trutta | ENSSTUP00000094046 | 57.3643 | 54.2636 | latimeria_chalumnae | ENSLACP00000014383 | 88.0952 | 83.3333 |
ENSSTUG00000041934 | salmo_trutta | ENSSTUP00000094046 | 57.3643 | 56.5891 | carassius_auratus | ENSCARP00000112729 | 41.1111 | 40.5556 |
ENSSTUG00000041934 | salmo_trutta | ENSSTUP00000094046 | 55.0388 | 51.938 | esox_lucius | ENSELUP00000070869 | 75.5319 | 71.2766 |
ENSSTUG00000041934 | salmo_trutta | ENSSTUP00000094046 | 58.9147 | 58.1395 | oncorhynchus_kisutch | ENSOKIP00005001044 | 77.551 | 76.5306 |
ENSSTUG00000041934 | salmo_trutta | ENSSTUP00000094046 | 59.6899 | 57.3643 | xiphophorus_maculatus | ENSXMAP00000016111 | 40.3141 | 38.7435 |
ENSSTUG00000041934 | salmo_trutta | ENSSTUP00000094046 | 58.9147 | 55.814 | cyclopterus_lumpus | ENSCLMP00005003536 | 90.4762 | 85.7143 |
ENSSTUG00000041934 | salmo_trutta | ENSSTUP00000094046 | 57.3643 | 55.814 | scophthalmus_maximus | ENSSMAP00000059545 | 66.0714 | 64.2857 |
ENSSTUG00000041934 | salmo_trutta | ENSSTUP00000094046 | 59.6899 | 56.5891 | cottoperca_gobio | ENSCGOP00000014639 | 91.6667 | 86.9048 |
ENSSTUG00000041934 | salmo_trutta | ENSSTUP00000094046 | 57.3643 | 55.0388 | xenopus_tropicalis | ENSXETP00000053425 | 50 | 47.973 |
ENSSTUG00000041934 | salmo_trutta | ENSSTUP00000094046 | 62.7907 | 57.3643 | fundulus_heteroclitus | ENSFHEP00000033815 | 60.9023 | 55.6391 |
ENSSTUG00000041934 | salmo_trutta | ENSSTUP00000094046 | 86.8217 | 82.9457 | hucho_hucho | ENSHHUP00000013451 | 73.2026 | 69.9346 |
ENSSTUG00000041934 | salmo_trutta | ENSSTUP00000094046 | 58.1395 | 55.814 | sander_lucioperca | ENSSLUP00000028133 | 78.9474 | 75.7895 |
ENSSTUG00000041934 | salmo_trutta | ENSSTUP00000094046 | 58.9147 | 55.814 | labrus_bergylta | ENSLBEP00000000334 | 90.4762 | 85.7143 |
ENSSTUG00000041934 | salmo_trutta | ENSSTUP00000094046 | 58.1395 | 55.0388 | ciona_savignyi | ENSCSAVP00000008994 | 89.2857 | 84.5238 |
ENSSTUG00000041934 | salmo_trutta | ENSSTUP00000094046 | 58.9147 | 56.5891 | hippocampus_comes | ENSHCOP00000020971 | 90.4762 | 86.9048 |
ENSSTUG00000041934 | salmo_trutta | ENSSTUP00000094046 | 58.1395 | 55.814 | larimichthys_crocea | ENSLCRP00005021775 | 89.2857 | 85.7143 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |